Click here to switch to the map view.

The map label for this gene is inlJ [H]

Identifier: 156976762

GI number: 156976762

Start: 741504

End: 742943

Strand: Reverse

Name: inlJ [H]

Synonym: VIBHAR_05537

Alternate gene names: 156976762

Gene position: 742943-741504 (Counterclockwise)

Preceding gene: 156976771

Following gene: 156976761

Centisome position: 33.71

GC content: 42.78

Gene sequence:

>1440_bases
ATGAAGGCGTCAGTGGTAAACCTAATCTGGTTATCCGGTAAAATGGTGATGGCAACAAGTGGATTGGCGTTATCCGGTTT
TGCGTATGGTTCCACTCCAGAAACCATTGGTGACATTCAGTTTGTCGACCCAAACTTTGCTGATTGCTTTTCTGGCTACG
AAGCGTCTTCACCAAATATTTTGACCGAACTCGACTGCTCCAACAATAACATTAGCTCTGTGGAAGAAATTAAATATTTC
CCTGTACTAGAAGACTTGATTCTCCTAAATAACAATATTAAAAGCGTCGATACTACAAATAATCCAAAGCTCAAACGCCT
GATCTTGGCGAACAACCAATTGACAGATATCGACCTCTCTCATAACCCAGAGCTTGAAACTCTGACTATTTCAGAAAACA
ACCTGACGCAGCTCAACATCAATAAGAACTTGAAGCTGAAAAGTCTCTACGCCTACAAAATGCCTATTGCAAAAATAGAC
ATACGCCATCTATCACGGTTGCGTGACCTTGGATTCAGTGCCCATAAACTGACAGAACTTAACGTTAGCCAAAACTCCGA
ACTAAAGACGCTCTTTCTTGGAAGTGGCAGCCTAACTACGATCGACTTAAACCATAACCCAAAGCTTTCGCACGTATCTC
TTCAATCAAACCAATTGCAAGAGATTGATTTATCGAAAAACGCGAATCTTAAGCACCTTAACGTGCGTAATAATAAGCTC
ACCAGTTTGGACTTAAGCCAACAGACACAGTTGCAAGAAGTTAAAGCAGACTACAACCAGTTAGCCGAATTCCAATTGGG
TAAAAACCCAAACTTAACATCACTCGAGCTAAACAATAATAAATTGACCAAACTGGATCTGACTCAACAACTGGCCTTGA
AGAAGTTCATAGCATTCAACAACCCACTTTATGATATTACATTGGCTAAAGGTCATGAGTTTGTTCTGTTTTCTGTCGAG
GGTTCACCTTATGCCGCTGCTCTAACGACGACCTCTCAAGCAAGCGAAGAGAAAAATATCTCAAACCTACTATCTCCTCG
TGTCAGCATTATTGAAGGTGGTGTAATAACGCAAGAGGGAAAAGAGTACACCGTGACTCCAACACAAATGGTGATGCCAA
AACTCGGCCAATACATTGGCTTTCGATACTCGGCTACGTTGCCCAAGAATGCGCAGGGTGAAGTAGAGCCTAGCCTTGCA
AAAACCAACAAATTCCCAATCACCGTCCGGATGACACATCCAAAGATTGTCGATCCTAAAACAGGCAAAGGATTCACCGA
ATCTACTTGGCCTGACACCATGTTTAAGCATGATCGTAACCTCGCGATGTGGTATTTCGGCGATAAAAGCGAGCTGGTGT
CTGGCCGTTGGCAACTCGAGATACTTTACCGCGATAGCGTCGTGGCAAAAAAAAGCCTTCCAGCTAGTCAATATGGATGA

Upstream 100 bases:

>100_bases
ATTCATTGTTGCTCTATTCATTGTCGAAACAGTATTCACTAACGGCAAGGCAATTGAGCGCCTAAAACTAAAAAGAAAAT
ACTTCGAAAAGGATTAATAT

Downstream 100 bases:

>100_bases
TCCGAAAGAACTCACTTCAATCAAGGAAGCTCTGGTCATGCAAAACTTACTCAGCAAAGGTTCTAGTTATGTTTGTAAAG
AAACCGCCTTTCAGCGCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MKASVVNLIWLSGKMVMATSGLALSGFAYGSTPETIGDIQFVDPNFADCFSGYEASSPNILTELDCSNNNISSVEEIKYF
PVLEDLILLNNNIKSVDTTNNPKLKRLILANNQLTDIDLSHNPELETLTISENNLTQLNINKNLKLKSLYAYKMPIAKID
IRHLSRLRDLGFSAHKLTELNVSQNSELKTLFLGSGSLTTIDLNHNPKLSHVSLQSNQLQEIDLSKNANLKHLNVRNNKL
TSLDLSQQTQLQEVKADYNQLAEFQLGKNPNLTSLELNNNKLTKLDLTQQLALKKFIAFNNPLYDITLAKGHEFVLFSVE
GSPYAAALTTTSQASEEKNISNLLSPRVSIIEGGVITQEGKEYTVTPTQMVMPKLGQYIGFRYSATLPKNAQGEVEPSLA
KTNKFPITVRMTHPKIVDPKTGKGFTESTWPDTMFKHDRNLAMWYFGDKSELVSGRWQLEILYRDSVVAKKSLPASQYG

Sequences:

>Translated_479_residues
MKASVVNLIWLSGKMVMATSGLALSGFAYGSTPETIGDIQFVDPNFADCFSGYEASSPNILTELDCSNNNISSVEEIKYF
PVLEDLILLNNNIKSVDTTNNPKLKRLILANNQLTDIDLSHNPELETLTISENNLTQLNINKNLKLKSLYAYKMPIAKID
IRHLSRLRDLGFSAHKLTELNVSQNSELKTLFLGSGSLTTIDLNHNPKLSHVSLQSNQLQEIDLSKNANLKHLNVRNNKL
TSLDLSQQTQLQEVKADYNQLAEFQLGKNPNLTSLELNNNKLTKLDLTQQLALKKFIAFNNPLYDITLAKGHEFVLFSVE
GSPYAAALTTTSQASEEKNISNLLSPRVSIIEGGVITQEGKEYTVTPTQMVMPKLGQYIGFRYSATLPKNAQGEVEPSLA
KTNKFPITVRMTHPKIVDPKTGKGFTESTWPDTMFKHDRNLAMWYFGDKSELVSGRWQLEILYRDSVVAKKSLPASQYG
>Mature_479_residues
MKASVVNLIWLSGKMVMATSGLALSGFAYGSTPETIGDIQFVDPNFADCFSGYEASSPNILTELDCSNNNISSVEEIKYF
PVLEDLILLNNNIKSVDTTNNPKLKRLILANNQLTDIDLSHNPELETLTISENNLTQLNINKNLKLKSLYAYKMPIAKID
IRHLSRLRDLGFSAHKLTELNVSQNSELKTLFLGSGSLTTIDLNHNPKLSHVSLQSNQLQEIDLSKNANLKHLNVRNNKL
TSLDLSQQTQLQEVKADYNQLAEFQLGKNPNLTSLELNNNKLTKLDLTQQLALKKFIAFNNPLYDITLAKGHEFVLFSVE
GSPYAAALTTTSQASEEKNISNLLSPRVSIIEGGVITQEGKEYTVTPTQMVMPKLGQYIGFRYSATLPKNAQGEVEPSLA
KTNKFPITVRMTHPKIVDPKTGKGFTESTWPDTMFKHDRNLAMWYFGDKSELVSGRWQLEILYRDSVVAKKSLPASQYG

Specific function: Involved in several steps of L.monocytogenes infection [H]

COG id: COG4886

COG function: function code S; Leucine-rich repeat (LRR) protein

Gene ontology:

Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 MucBP domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014755
- InterPro:   IPR009459
- InterPro:   IPR019931
- InterPro:   IPR001899 [H]

Pfam domain/function: PF06458 MucBP [H]

EC number: NA

Molecular weight: Translated: 53433; Mature: 53433

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASVVNLIWLSGKMVMATSGLALSGFAYGSTPETIGDIQFVDPNFADCFSGYEASSPNI
CCCEEEEEEEECCEEEEEECCCEEEEEECCCCCCCCCCEEEECCCHHHHHCCCCCCCCCE
LTELDCSNNNISSVEEIKYFPVLEDLILLNNNIKSVDTTNNPKLKRLILANNQLTDIDLS
EEEEECCCCCCCCHHHEEHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEEECC
HNPELETLTISENNLTQLNINKNLKLKSLYAYKMPIAKIDIRHLSRLRDLGFSAHKLTEL
CCCCEEEEEECCCCEEEEECCCCCEEEEEEEEECCCEEECHHHHHHHHHCCCCCCEEEEE
NVSQNSELKTLFLGSGSLTTIDLNHNPKLSHVSLQSNQLQEIDLSKNANLKHLNVRNNKL
CCCCCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCCEEEECCCCCCEEEEEECCCEE
TSLDLSQQTQLQEVKADYNQLAEFQLGKNPNLTSLELNNNKLTKLDLTQQLALKKFIAFN
EEECCCHHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHCC
NPLYDITLAKGHEFVLFSVEGSPYAAALTTTSQASEEKNISNLLSPRVSIIEGGVITQEG
CCEEEEEEECCCEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHCCCEEEEECCEEECCC
KEYTVTPTQMVMPKLGQYIGFRYSATLPKNAQGEVEPSLAKTNKFPITVRMTHPKIVDPK
CEEEECHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCHHHCCCCEEEEEECCCEEECCC
TGKGFTESTWPDTMFKHDRNLAMWYFGDKSELVSGRWQLEILYRDSVVAKKSLPASQYG
CCCCCCCCCCCCHHHHCCCCEEEEEECCHHHHCCCEEEEEEEEECCEEECCCCCCCCCC
>Mature Secondary Structure
MKASVVNLIWLSGKMVMATSGLALSGFAYGSTPETIGDIQFVDPNFADCFSGYEASSPNI
CCCEEEEEEEECCEEEEEECCCEEEEEECCCCCCCCCCEEEECCCHHHHHCCCCCCCCCE
LTELDCSNNNISSVEEIKYFPVLEDLILLNNNIKSVDTTNNPKLKRLILANNQLTDIDLS
EEEEECCCCCCCCHHHEEHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEEECC
HNPELETLTISENNLTQLNINKNLKLKSLYAYKMPIAKIDIRHLSRLRDLGFSAHKLTEL
CCCCEEEEEECCCCEEEEECCCCCEEEEEEEEECCCEEECHHHHHHHHHCCCCCCEEEEE
NVSQNSELKTLFLGSGSLTTIDLNHNPKLSHVSLQSNQLQEIDLSKNANLKHLNVRNNKL
CCCCCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCCEEEECCCCCCEEEEEECCCEE
TSLDLSQQTQLQEVKADYNQLAEFQLGKNPNLTSLELNNNKLTKLDLTQQLALKKFIAFN
EEECCCHHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHCC
NPLYDITLAKGHEFVLFSVEGSPYAAALTTTSQASEEKNISNLLSPRVSIIEGGVITQEG
CCEEEEEEECCCEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHCCCEEEEECCEEECCC
KEYTVTPTQMVMPKLGQYIGFRYSATLPKNAQGEVEPSLAKTNKFPITVRMTHPKIVDPK
CEEEECHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCHHHCCCCEEEEEECCCEEECCC
TGKGFTESTWPDTMFKHDRNLAMWYFGDKSELVSGRWQLEILYRDSVVAKKSLPASQYG
CCCCCCCCCCCCHHHHCCCCEEEEEECCHHHHCCCEEEEEEEEECCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]