| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is artM [H]
Identifier: 156976756
GI number: 156976756
Start: 738147
End: 738815
Strand: Direct
Name: artM [H]
Synonym: VIBHAR_05531
Alternate gene names: 156976756
Gene position: 738147-738815 (Clockwise)
Preceding gene: 156976755
Following gene: 156976757
Centisome position: 33.49
GC content: 47.83
Gene sequence:
>669_bases ATGAACGAACAACATGTTTGGCAAATGCTGGATGGCTTAGGCACTAGCCTTCAATTGACCGCCGCTTCCTTGGTTGTGGG CTGTCTTTTAGCTTTGATGATGACGCTGACTCTGATCCTACGTACTCCGGGTTTACATTGGGTAAGTCGTGGCATCATCA CCTTGTTCACAGGTACACCTTTGTTGGTACAGATCTTCTTGGTGTACTACGGTCCAGGTCAGTTTGATGCAGTAAGAGAA AGTGTATTCTGGACATGGTTAAGCCAACCTTGGTTCTGTGCGATGTTAGCGCTAGCGCTCAATACCGCGGCATACAGTAC TCAGTTGTTCAAAGGGGCTTTTAACGCGATTCCTTCTGGTCAGTGGCAAGCGTGTCGTGCTCTGGGTATGAACAAAGCCG CAACGCTGAAAGTGCTGCTGCCTTACGCTATTCGCCGTGCTGTTCCGGCTTACTCGAACGAAGTGATTTTGGTCTTCAAA GGCACGTCACTAGCAAGCACGATTACGATCATGGATCTGATGGGTTACGCGCAGCGCATTAACGCACAAACTTACGATAC ATTGACGGTATTTGGTATTGCAGGCGCATTTTATTTAACGGTAAATGGTGTGCTAACTCTCATTTTCCGTCAGGTAGAGA AGAAAGCATTGGCGTTCGAAGCCGCATAA
Upstream 100 bases:
>100_bases CGATTTACTTAGGCATTACTTTGATTACACAACGTGCCGTCAAACTGATTGATAAGAAATTCTCAATTCAAGGCATGAGC ATGGGACAGGAGGCAACCGC
Downstream 100 bases:
>100_bases ATCTTCAATCAAACACTCATCATTTAGTTCCACAGTGCCTCTGCAAATGACTCTCTAGCAGGGGCATTTTTTATATTCGT CATGGCAAATCGCTCAAGTT
Product: arginine transporter permease subunit ArtM
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MNEQHVWQMLDGLGTSLQLTAASLVVGCLLALMMTLTLILRTPGLHWVSRGIITLFTGTPLLVQIFLVYYGPGQFDAVRE SVFWTWLSQPWFCAMLALALNTAAYSTQLFKGAFNAIPSGQWQACRALGMNKAATLKVLLPYAIRRAVPAYSNEVILVFK GTSLASTITIMDLMGYAQRINAQTYDTLTVFGIAGAFYLTVNGVLTLIFRQVEKKALAFEAA
Sequences:
>Translated_222_residues MNEQHVWQMLDGLGTSLQLTAASLVVGCLLALMMTLTLILRTPGLHWVSRGIITLFTGTPLLVQIFLVYYGPGQFDAVRE SVFWTWLSQPWFCAMLALALNTAAYSTQLFKGAFNAIPSGQWQACRALGMNKAATLKVLLPYAIRRAVPAYSNEVILVFK GTSLASTITIMDLMGYAQRINAQTYDTLTVFGIAGAFYLTVNGVLTLIFRQVEKKALAFEAA >Mature_222_residues MNEQHVWQMLDGLGTSLQLTAASLVVGCLLALMMTLTLILRTPGLHWVSRGIITLFTGTPLLVQIFLVYYGPGQFDAVRE SVFWTWLSQPWFCAMLALALNTAAYSTQLFKGAFNAIPSGQWQACRALGMNKAATLKVLLPYAIRRAVPAYSNEVILVFK GTSLASTITIMDLMGYAQRINAQTYDTLTVFGIAGAFYLTVNGVLTLIFRQVEKKALAFEAA
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4160
COG function: function code E; ABC-type arginine/histidine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787086, Length=218, Percent_Identity=60.5504587155963, Blast_Score=272, Evalue=1e-74, Organism=Escherichia coli, GI1788645, Length=206, Percent_Identity=38.3495145631068, Blast_Score=133, Evalue=8e-33, Organism=Escherichia coli, GI1788226, Length=208, Percent_Identity=34.1346153846154, Blast_Score=118, Evalue=4e-28, Organism=Escherichia coli, GI1787087, Length=236, Percent_Identity=27.1186440677966, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1787030, Length=213, Percent_Identity=28.169014084507, Blast_Score=88, Evalue=4e-19, Organism=Escherichia coli, GI1788646, Length=214, Percent_Identity=25.2336448598131, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1786873, Length=215, Percent_Identity=24.6511627906977, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1786874, Length=171, Percent_Identity=28.0701754385965, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24384; Mature: 24384
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEQHVWQMLDGLGTSLQLTAASLVVGCLLALMMTLTLILRTPGLHWVSRGIITLFTGTP CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEEECCCH LLVQIFLVYYGPGQFDAVRESVFWTWLSQPWFCAMLALALNTAAYSTQLFKGAFNAIPSG HHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QWQACRALGMNKAATLKVLLPYAIRRAVPAYSNEVILVFKGTSLASTITIMDLMGYAQRI HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH NAQTYDTLTVFGIAGAFYLTVNGVLTLIFRQVEKKALAFEAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNEQHVWQMLDGLGTSLQLTAASLVVGCLLALMMTLTLILRTPGLHWVSRGIITLFTGTP CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEEECCCH LLVQIFLVYYGPGQFDAVRESVFWTWLSQPWFCAMLALALNTAAYSTQLFKGAFNAIPSG HHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QWQACRALGMNKAATLKVLLPYAIRRAVPAYSNEVILVFKGTSLASTITIMDLMGYAQRI HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH NAQTYDTLTVFGIAGAFYLTVNGVLTLIFRQVEKKALAFEAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]