Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976733

Identifier: 156976733

GI number: 156976733

Start: 717946

End: 718677

Strand: Direct

Name: 156976733

Synonym: VIBHAR_05508

Alternate gene names: NA

Gene position: 717946-718677 (Clockwise)

Preceding gene: 156976732

Following gene: 156976738

Centisome position: 32.57

GC content: 46.58

Gene sequence:

>732_bases
ATGATCGTTTCTCACAATGAGCTGGTGGCTGCGGTAAACAAAGCCTTCCTAGGGATGTGTCGTCACTGTGGTGAAGCGGA
TGTTATTGCTAACATGGTTGCGGACCTACAAATGGTTGGTTTACACGGTGTACGTCACTTTAACAACGCCAGTCTGTTCC
TTAGTCTCGATTCGGACTGCGCAGTCACCATTGCTTGCAACACAGACTCGTCCATTGAAGTGGACTTACACAATGGTAGT
GTTGCATGTCATTTACCAGCGGTGTTGGACTTTGCGTTAGAAAAGATGGTGAAGAGTAAGTCAGTCACCGTTACGTTAAA
ACAATGCCACAACCGTTGGCTAGCATTTAGTGAGTTAGCTCGATTGTCTGCCAAGGGGATTGCCTGTCGTGCGCAATGGG
TGAATGGTACTAGTCCAAAACGCACCTTATATGTGTTAAATCGAGGTCACATTGCACCAGAAGTCTTCTTTTCCGATGTG
ATAGAAGGGTACGGTACGGATTACCACAACATGATCATAGAACTCTCCACCAACGATTTTAACCTTGATGCGAGTTCGCA
GGGCTACGCTATTCATATCGAAGGTGAAGAGCTAAGCCGTGCACAAAAGGCATCATGGGAAGAGGGTATATTTGTGGAGG
ATGCGGAGTGGGAAACCTTAAAACAGACCGCCACCGTGTTCCTTGTCGAAAATAGTGAGCGTTCTATTCAAGGTGCTGGT
GAATTAGCTTGA

Upstream 100 bases:

>100_bases
ACGAGCCTGAGTATACCGATAGTTGGATCTTCCCAACTATGCCTGAGTGTGAAGACATCGCGCGAAGCGACAATCAAAAA
ATCGATGGGGGTTTTGCATA

Downstream 100 bases:

>100_bases
TACCGATCCTTTGACGAAAATACTAAGAGGCTGCCTTTAGGTCTGTCTCTTGATCACAAGTCTAGTGATCAAGAGACATT
GCGAGTTCGTAGCCCTCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MIVSHNELVAAVNKAFLGMCRHCGEADVIANMVADLQMVGLHGVRHFNNASLFLSLDSDCAVTIACNTDSSIEVDLHNGS
VACHLPAVLDFALEKMVKSKSVTVTLKQCHNRWLAFSELARLSAKGIACRAQWVNGTSPKRTLYVLNRGHIAPEVFFSDV
IEGYGTDYHNMIIELSTNDFNLDASSQGYAIHIEGEELSRAQKASWEEGIFVEDAEWETLKQTATVFLVENSERSIQGAG
ELA

Sequences:

>Translated_243_residues
MIVSHNELVAAVNKAFLGMCRHCGEADVIANMVADLQMVGLHGVRHFNNASLFLSLDSDCAVTIACNTDSSIEVDLHNGS
VACHLPAVLDFALEKMVKSKSVTVTLKQCHNRWLAFSELARLSAKGIACRAQWVNGTSPKRTLYVLNRGHIAPEVFFSDV
IEGYGTDYHNMIIELSTNDFNLDASSQGYAIHIEGEELSRAQKASWEEGIFVEDAEWETLKQTATVFLVENSERSIQGAG
ELA
>Mature_243_residues
MIVSHNELVAAVNKAFLGMCRHCGEADVIANMVADLQMVGLHGVRHFNNASLFLSLDSDCAVTIACNTDSSIEVDLHNGS
VACHLPAVLDFALEKMVKSKSVTVTLKQCHNRWLAFSELARLSAKGIACRAQWVNGTSPKRTLYVLNRGHIAPEVFFSDV
IEGYGTDYHNMIIELSTNDFNLDASSQGYAIHIEGEELSRAQKASWEEGIFVEDAEWETLKQTATVFLVENSERSIQGAG
ELA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26660; Mature: 26660

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVSHNELVAAVNKAFLGMCRHCGEADVIANMVADLQMVGLHGVRHFNNASLFLSLDSDC
CEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCEEECCCCEEEEEECCCE
AVTIACNTDSSIEVDLHNGSVACHLPAVLDFALEKMVKSKSVTVTLKQCHNRWLAFSELA
EEEEEECCCCEEEEEEECCEEEEEHHHHHHHHHHHHHCCCCEEEEHHHHCCHHHHHHHHH
RLSAKGIACRAQWVNGTSPKRTLYVLNRGHIAPEVFFSDVIEGYGTDYHNMIIELSTNDF
HHHCCCEEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCHHEEEEEECCCE
NLDASSQGYAIHIEGEELSRAQKASWEEGIFVEDAEWETLKQTATVFLVENSERSIQGAG
ECCCCCCCEEEEEECHHHHHHHHCCCCCCEEEECCCHHHHHCEEEEEEEECCCCCCCCCC
ELA
CCC
>Mature Secondary Structure
MIVSHNELVAAVNKAFLGMCRHCGEADVIANMVADLQMVGLHGVRHFNNASLFLSLDSDC
CEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCEEECCCCEEEEEECCCE
AVTIACNTDSSIEVDLHNGSVACHLPAVLDFALEKMVKSKSVTVTLKQCHNRWLAFSELA
EEEEEECCCCEEEEEEECCEEEEEHHHHHHHHHHHHHCCCCEEEEHHHHCCHHHHHHHHH
RLSAKGIACRAQWVNGTSPKRTLYVLNRGHIAPEVFFSDVIEGYGTDYHNMIIELSTNDF
HHHCCCEEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCHHEEEEEECCCE
NLDASSQGYAIHIEGEELSRAQKASWEEGIFVEDAEWETLKQTATVFLVENSERSIQGAG
ECCCCCCCEEEEEECHHHHHHHHCCCCCCEEEECCCHHHHHCEEEEEEEECCCCCCCCCC
ELA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA