| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976732
Identifier: 156976732
GI number: 156976732
Start: 716213
End: 717946
Strand: Direct
Name: 156976732
Synonym: VIBHAR_05507
Alternate gene names: NA
Gene position: 716213-717946 (Clockwise)
Preceding gene: 156976731
Following gene: 156976733
Centisome position: 32.5
GC content: 47.0
Gene sequence:
>1734_bases ATGGATGCACATCGTTCTACTTACACTGAAACAACGCTTCGCGACGCTGCTACTGTGATGGCGCCAGATAGGCTAGGGGC TATGCACCAAAACCGAATCAGCTTTGTGAGAAGTTTGATTCGAAAGATGGCAAGACAAGAATGGCAAGTCAGTAAACATG AATGGCAATTGTGCCCACGTGGTTTTGGTCATGTAATTTATAAACTTGAGACGCCAGAGCATGTATATCACTTGGTTGTA TTTTGCGATGAGATTGGCGATGAAGAACGCAATGATCGCGTTATCGCCGAGAAATGGGACGTCACCTTTGCACTTGTGAA AGGGGATGTCCATGTCGAGCTCTTAGAACAGCTAAGAGCCAATGTGCCCTTGCAAGAAGCAGGGCGTAACACTAACAACG TACTTGTTCTTGCTCGTGCGAACAAAAGTGTCCGCGTGTTTGAACATCTCGTTGCTGCATTGGCAAAAGGTGAGCAACCA GATCCTACTGAACTTGCAGAGGTTGGCTACATACTGAGAACGACAGCCGTATACGGAAACGGCAAGTTTGGTATAGCCGA TTTTAAGCTGTTAGAGAACAATCCTGATTTCAATCAATCCTTCAGTGCGCAAATGTGTGCGGTGTACATGCTTAGAGAGT TCAGCCTTGATTGGGTGCACTATCTAGCTCAGCAACAAGGTGGAGACAAAGCCATTGCTTTACACAAAGGGCTTCAACGT TACCTAGGTGTGGGGAATGCAACAGGATTAGGTATGGCGCCTTATCTTATCAACCACCCTTGCATTGTTGATCAATGGAT GACGTCACGTGAGCGTGCTATTGCTCAAGTATTGTCGATGCCTTGTGAGATCCAGCAAGAAGCGCCACTGACAGCGTTGT TGGCAAAAGCGCAGCGTCATTTAGAGCAGGTGATCACCATTAATGAACATCAAGACCAACTGAACCAGAAAGCGATAGAA GACATTCAGGCGCTGCAAACTAACTTGAATGCCTTGATGGCGAAACACGTGAACTGGGCAAGCTTGCTCAAACAAACCAC AACAATGAGTTTGGAAGCCCAAGAAATCCTAACTTCATGTTTGATCGAGCTTTACCCGTCTTTGGTTGATGAATTTGAAA ACCAAATGAACACCGATGAATCTTTGTCTATTTCTGGCGGAAAAAGCCTCCAAGATGTTTCGCAAATACTAGAGAGCAAA TACCGTTGGTCGATTGATGTGGACTATTCGTTACCAGAGAACAACTATTGGTTCTGGTATCGCTCCCAAGATAAAGAGGA GCCGAGGTTAGGTGTTCGTGGAGAGGAGATTGGTGAAGAACGTGAGCTGCCGCTGGATATTGGGCGGCAAGTAAACCGAC TCTACCATGCTCTACAAACGTGTCAGCCAGACACATCGTTAGCAGAGTTCTTGTTGCAACACCCGCAGTATCGTGCAATC ACTCGTCGTGTGTGGACGCTTGGTAATAGAGAGATGGGTGATATCCAAATGAACGTACTTCGTAAGGGTGCCCTGCCAAT GCACTTGCTGCGCTGTAAGCTAGCGATGTTTGGCGCTACCAAGTTCGACCCGAGGTCTGATCGCTGGGTGCGCGTGACTT TCTTCCAAGGTGCCCCACTTTGGGATGAAATCAACGAGCCTGAGTATACCGATAGTTGGATCTTCCCAACTATGCCTGAG TGTGAAGACATCGCGCGAAGCGACAATCAAAAAATCGATGGGGGTTTTGCATAA
Upstream 100 bases:
>100_bases ATGCTTTAAAAAAACAATAACGTGGAGCTTGTGCGGGTTATAACCCTCCTACACCCGCACAAGTCTATATTCTTACAATA AAAAATAGGTGGTGAGCAAA
Downstream 100 bases:
>100_bases TGATCGTTTCTCACAATGAGCTGGTGGCTGCGGTAAACAAAGCCTTCCTAGGGATGTGTCGTCACTGTGGTGAAGCGGAT GTTATTGCTAACATGGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MDAHRSTYTETTLRDAATVMAPDRLGAMHQNRISFVRSLIRKMARQEWQVSKHEWQLCPRGFGHVIYKLETPEHVYHLVV FCDEIGDEERNDRVIAEKWDVTFALVKGDVHVELLEQLRANVPLQEAGRNTNNVLVLARANKSVRVFEHLVAALAKGEQP DPTELAEVGYILRTTAVYGNGKFGIADFKLLENNPDFNQSFSAQMCAVYMLREFSLDWVHYLAQQQGGDKAIALHKGLQR YLGVGNATGLGMAPYLINHPCIVDQWMTSRERAIAQVLSMPCEIQQEAPLTALLAKAQRHLEQVITINEHQDQLNQKAIE DIQALQTNLNALMAKHVNWASLLKQTTTMSLEAQEILTSCLIELYPSLVDEFENQMNTDESLSISGGKSLQDVSQILESK YRWSIDVDYSLPENNYWFWYRSQDKEEPRLGVRGEEIGEERELPLDIGRQVNRLYHALQTCQPDTSLAEFLLQHPQYRAI TRRVWTLGNREMGDIQMNVLRKGALPMHLLRCKLAMFGATKFDPRSDRWVRVTFFQGAPLWDEINEPEYTDSWIFPTMPE CEDIARSDNQKIDGGFA
Sequences:
>Translated_577_residues MDAHRSTYTETTLRDAATVMAPDRLGAMHQNRISFVRSLIRKMARQEWQVSKHEWQLCPRGFGHVIYKLETPEHVYHLVV FCDEIGDEERNDRVIAEKWDVTFALVKGDVHVELLEQLRANVPLQEAGRNTNNVLVLARANKSVRVFEHLVAALAKGEQP DPTELAEVGYILRTTAVYGNGKFGIADFKLLENNPDFNQSFSAQMCAVYMLREFSLDWVHYLAQQQGGDKAIALHKGLQR YLGVGNATGLGMAPYLINHPCIVDQWMTSRERAIAQVLSMPCEIQQEAPLTALLAKAQRHLEQVITINEHQDQLNQKAIE DIQALQTNLNALMAKHVNWASLLKQTTTMSLEAQEILTSCLIELYPSLVDEFENQMNTDESLSISGGKSLQDVSQILESK YRWSIDVDYSLPENNYWFWYRSQDKEEPRLGVRGEEIGEERELPLDIGRQVNRLYHALQTCQPDTSLAEFLLQHPQYRAI TRRVWTLGNREMGDIQMNVLRKGALPMHLLRCKLAMFGATKFDPRSDRWVRVTFFQGAPLWDEINEPEYTDSWIFPTMPE CEDIARSDNQKIDGGFA >Mature_577_residues MDAHRSTYTETTLRDAATVMAPDRLGAMHQNRISFVRSLIRKMARQEWQVSKHEWQLCPRGFGHVIYKLETPEHVYHLVV FCDEIGDEERNDRVIAEKWDVTFALVKGDVHVELLEQLRANVPLQEAGRNTNNVLVLARANKSVRVFEHLVAALAKGEQP DPTELAEVGYILRTTAVYGNGKFGIADFKLLENNPDFNQSFSAQMCAVYMLREFSLDWVHYLAQQQGGDKAIALHKGLQR YLGVGNATGLGMAPYLINHPCIVDQWMTSRERAIAQVLSMPCEIQQEAPLTALLAKAQRHLEQVITINEHQDQLNQKAIE DIQALQTNLNALMAKHVNWASLLKQTTTMSLEAQEILTSCLIELYPSLVDEFENQMNTDESLSISGGKSLQDVSQILESK YRWSIDVDYSLPENNYWFWYRSQDKEEPRLGVRGEEIGEERELPLDIGRQVNRLYHALQTCQPDTSLAEFLLQHPQYRAI TRRVWTLGNREMGDIQMNVLRKGALPMHLLRCKLAMFGATKFDPRSDRWVRVTFFQGAPLWDEINEPEYTDSWIFPTMPE CEDIARSDNQKIDGGFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66092; Mature: 66092
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAHRSTYTETTLRDAATVMAPDRLGAMHQNRISFVRSLIRKMARQEWQVSKHEWQLCPR CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC GFGHVIYKLETPEHVYHLVVFCDEIGDEERNDRVIAEKWDVTFALVKGDVHVELLEQLRA CCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEEECCHHHHHHHHHHH NVPLQEAGRNTNNVLVLARANKSVRVFEHLVAALAKGEQPDPTELAEVGYILRTTAVYGN CCCHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEECC GKFGIADFKLLENNPDFNQSFSAQMCAVYMLREFSLDWVHYLAQQQGGDKAIALHKGLQR CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHH YLGVGNATGLGMAPYLINHPCIVDQWMTSRERAIAQVLSMPCEIQQEAPLTALLAKAQRH HHCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH LEQVITINEHQDQLNQKAIEDIQALQTNLNALMAKHVNWASLLKQTTTMSLEAQEILTSC HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHH LIELYPSLVDEFENQMNTDESLSISGGKSLQDVSQILESKYRWSIDVDYSLPENNYWFWY HHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCEEEEE RSQDKEEPRLGVRGEEIGEERELPLDIGRQVNRLYHALQTCQPDTSLAEFLLQHPQYRAI CCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHH TRRVWTLGNREMGDIQMNVLRKGALPMHLLRCKLAMFGATKFDPRSDRWVRVTFFQGAPL HHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCC WDEINEPEYTDSWIFPTMPECEDIARSDNQKIDGGFA HHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC >Mature Secondary Structure MDAHRSTYTETTLRDAATVMAPDRLGAMHQNRISFVRSLIRKMARQEWQVSKHEWQLCPR CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC GFGHVIYKLETPEHVYHLVVFCDEIGDEERNDRVIAEKWDVTFALVKGDVHVELLEQLRA CCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEEECCHHHHHHHHHHH NVPLQEAGRNTNNVLVLARANKSVRVFEHLVAALAKGEQPDPTELAEVGYILRTTAVYGN CCCHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEECC GKFGIADFKLLENNPDFNQSFSAQMCAVYMLREFSLDWVHYLAQQQGGDKAIALHKGLQR CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHH YLGVGNATGLGMAPYLINHPCIVDQWMTSRERAIAQVLSMPCEIQQEAPLTALLAKAQRH HHCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH LEQVITINEHQDQLNQKAIEDIQALQTNLNALMAKHVNWASLLKQTTTMSLEAQEILTSC HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHH LIELYPSLVDEFENQMNTDESLSISGGKSLQDVSQILESKYRWSIDVDYSLPENNYWFWY HHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCEEEEE RSQDKEEPRLGVRGEEIGEERELPLDIGRQVNRLYHALQTCQPDTSLAEFLLQHPQYRAI CCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHH TRRVWTLGNREMGDIQMNVLRKGALPMHLLRCKLAMFGATKFDPRSDRWVRVTFFQGAPL HHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCC WDEINEPEYTDSWIFPTMPECEDIARSDNQKIDGGFA HHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA