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The map label for this gene is cyoA [H]

Identifier: 156976716

GI number: 156976716

Start: 702589

End: 703410

Strand: Direct

Name: cyoA [H]

Synonym: VIBHAR_05491

Alternate gene names: 156976716

Gene position: 702589-703410 (Clockwise)

Preceding gene: 156976715

Following gene: 156976717

Centisome position: 31.88

GC content: 48.3

Gene sequence:

>822_bases
ATGCTCGCAGGGTGTAACTCTGCTCTACTTGACCCGAAAGGTAGTATTGGCGTTCAGGAGAAAGAGCTGATCATCACAGC
CCTTCTACTGATGCTGATTGTCGTGATCCCTGTGATTCTTATGACAATCTACTTTGCTTACCGCTACCGTGAGTCAAATA
CAGGCGAGGAGTACGCGCCGGATTGGTCGCATTCGACCAAGATCGAAGTGGTGGTATGGACTATTCCAATCATCATCATC
GCGATTCTAGCCGCCATCACTTGGCGCTCTACTCATGAGTTAGAGCCATCTAAGCCAATCGAAAGTGATGTTAAACCGAT
CACCATCGAAGTGGTGTCGCTCGACTGGAAATGGCTATTCATTTACCCAGAAGAGAACATTGCGACAGTTAACTACGTGG
CATTCCCTAAAGATGTTCCTGTTCAGTTCAAACTGACGTCGGACAACATCATGAACGCGTTCTTCATCCCACGTTTGGGA
ACACAGATTTACGCAATGCCTGGCATGGTGACCAAGCTGAACCTGATTGCGAATCACACTGGTGATTACAAAGGTTTTGC
TTCTAACTACAGCGGTGAAGGCTTCTCACAAATGAAGTTCACAGCATCGGCAATGGAAGATCGCACGGCATTCCTAAACT
GGGTGCAACAAGTGAAAGCTAGCCCAGATCGTATTGAAGACTGGGAGCAATTCCGCTCGCTTGCATCACCAACGGTGGCT
GAGCCTGTGAAGCTGTTCTCTAGCGTTCCACCATTTTTGTTCACCGACGTCGTGACCCAGCATCCGGGTTCAATGAACTG
CTTGCCGGAAAATCTAGGATAA

Upstream 100 bases:

>100_bases
CAGGGCTTGCTCTGTTATTGGCTAACCATCGAGAAAGTTAATGGAAGCTTCAAGATATACACGCATCTTATCGAGGATAA
GTTTGGTGGCGACCATCCTT

Downstream 100 bases:

>100_bases
CCGCAATGTTTGGAAGATTAACACTTGAATCAATCCCTTATCACGAGCCGATTATCGTCGTCACTCTAGCGGTGATCGCG
ATCGTTGGTTTGGCTGTCGT

Product: cytochrome o ubiquinol oxidase, subunit II

Products: NA

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Ubiquinol oxidase chain B; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MLAGCNSALLDPKGSIGVQEKELIITALLLMLIVVIPVILMTIYFAYRYRESNTGEEYAPDWSHSTKIEVVVWTIPIIII
AILAAITWRSTHELEPSKPIESDVKPITIEVVSLDWKWLFIYPEENIATVNYVAFPKDVPVQFKLTSDNIMNAFFIPRLG
TQIYAMPGMVTKLNLIANHTGDYKGFASNYSGEGFSQMKFTASAMEDRTAFLNWVQQVKASPDRIEDWEQFRSLASPTVA
EPVKLFSSVPPFLFTDVVTQHPGSMNCLPENLG

Sequences:

>Translated_273_residues
MLAGCNSALLDPKGSIGVQEKELIITALLLMLIVVIPVILMTIYFAYRYRESNTGEEYAPDWSHSTKIEVVVWTIPIIII
AILAAITWRSTHELEPSKPIESDVKPITIEVVSLDWKWLFIYPEENIATVNYVAFPKDVPVQFKLTSDNIMNAFFIPRLG
TQIYAMPGMVTKLNLIANHTGDYKGFASNYSGEGFSQMKFTASAMEDRTAFLNWVQQVKASPDRIEDWEQFRSLASPTVA
EPVKLFSSVPPFLFTDVVTQHPGSMNCLPENLG
>Mature_273_residues
MLAGCNSALLDPKGSIGVQEKELIITALLLMLIVVIPVILMTIYFAYRYRESNTGEEYAPDWSHSTKIEVVVWTIPIIII
AILAAITWRSTHELEPSKPIESDVKPITIEVVSLDWKWLFIYPEENIATVNYVAFPKDVPVQFKLTSDNIMNAFFIPRLG
TQIYAMPGMVTKLNLIANHTGDYKGFASNYSGEGFSQMKFTASAMEDRTAFLNWVQQVKASPDRIEDWEQFRSLASPTVA
EPVKLFSSVPPFLFTDVVTQHPGSMNCLPENLG

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=269, Percent_Identity=58.7360594795539, Blast_Score=337, Evalue=7e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 30656; Mature: 30656

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAGCNSALLDPKGSIGVQEKELIITALLLMLIVVIPVILMTIYFAYRYRESNTGEEYAP
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DWSHSTKIEVVVWTIPIIIIAILAAITWRSTHELEPSKPIESDVKPITIEVVSLDWKWLF
CCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECEEEEE
IYPEENIATVNYVAFPKDVPVQFKLTSDNIMNAFFIPRLGTQIYAMPGMVTKLNLIANHT
EEECCCEEEEEEEECCCCCCEEEEECCCCCCHHHHHCCCCCEEEECCCHHHEEHHHHCCC
GDYKGFASNYSGEGFSQMKFTASAMEDRTAFLNWVQQVKASPDRIEDWEQFRSLASPTVA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHH
EPVKLFSSVPPFLFTDVVTQHPGSMNCLPENLG
HHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MLAGCNSALLDPKGSIGVQEKELIITALLLMLIVVIPVILMTIYFAYRYRESNTGEEYAP
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DWSHSTKIEVVVWTIPIIIIAILAAITWRSTHELEPSKPIESDVKPITIEVVSLDWKWLF
CCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECEEEEE
IYPEENIATVNYVAFPKDVPVQFKLTSDNIMNAFFIPRLGTQIYAMPGMVTKLNLIANHT
EEECCCEEEEEEEECCCCCCEEEEECCCCCCHHHHHCCCCCEEEECCCHHHEEHHHHCCC
GDYKGFASNYSGEGFSQMKFTASAMEDRTAFLNWVQQVKASPDRIEDWEQFRSLASPTVA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHH
EPVKLFSSVPPFLFTDVVTQHPGSMNCLPENLG
HHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]