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The map label for this gene is 156976689

Identifier: 156976689

GI number: 156976689

Start: 677694

End: 679850

Strand: Reverse

Name: 156976689

Synonym: VIBHAR_05464

Alternate gene names: NA

Gene position: 679850-677694 (Counterclockwise)

Preceding gene: 156976690

Following gene: 156976687

Centisome position: 30.85

GC content: 49.75

Gene sequence:

>2157_bases
ATGAGCACATTCTGGAACTGGTGGGCAATTGCCGCCACGATTGTCTTCTTCATATTGATGGTGTCTGTCATCGTCAAATA
TTGGCGTAGCAACCATAAAGCAGACCAAGACCATACCATCGCCTCCTTCGATGGCATTGATGAAAAAGACGCACCGCCAC
CCAAGTTACTGTTTGCCAGTTACGCGGTCGCCTTTCTGTTGTCAGCAGGATACCTAGTTTTATATCCGGGCTTGGGCGAA
TGGAAAGGTTTGGCGAATTACGATCAAAGCGACGATAAACTCAGCGCACCGTCAACGACGCTTGATGAACAATTTAGCCA
AGTTACGGACATGTCGCTCGATGCATTGGCACAAAACGGCGATATCGTTCGTTCTGGTCACATCCTTTTTCAAACCCATT
GTGCCGCTTGTCACCGAGACAATGCTCAGGGCCAAAAGCACTTCCCTAACCTGATCGATAAAGAATGGATGTATGGCGGC
GATGACGAAGCTCTGATTCATTCTATTGCCAAAGGTCGTAACGGCGCCATGCCGGGATGGGTAGAGGTCATGAGGAAAGA
CGAAGTCGATAAGGTCGCCTATTACCTTGCATCCCTTAACCAACGTCACAGTGACGTACCAGAAGTGAAAGTTGAGTTAG
GTAAGGATTTGTTCGTCGAATATTGCTCGTCATGTCATGGTGACGGCTCTATAGCAAATCAACAAACGGGCGTGCCTGAC
CTATCAGACAGTGTCTGGCTACATGGCGGGAGCATCGAGGAGATTCAGCACACCATCAATTATGGTTTGAATAACTTGAT
GCCTGCGTTTGAAAACCAACTTTCTGAGCACGAAATCCTCGCACTGGGTGCTTACATCCGTAAAGCGGGTGAAGAACAAG
AGCTGAAACTCGCAGCGCTGAATGCTGAGTCAGTGAAACGCGGTGAGTACCTTGCCCATGCTGGGGACTGTGTGGCTTGC
CACAGTGCTGAAGGTGGCGAACCTTTTGCAGGCGGTCTGCCGTTCGTTACCCCATTCGGCACTATTTATTCCACCAATAT
CACGCCCCATGCCAGTGCAGGTATCGGTGAATATGATTATGATGACTTCCGGGATGCGCTTGTGAAGGGGAAAGGCAAAC
ATGGTTACCTGTATCCTGCAATGCCCTACACGTCTTATCAATACCTCACGGAACAAGACATGATGGATTTATGGGAGTAC
ATGCAATCTATTCCTGCCGTGGCGCGTCGTAACGATGAAAACCATATGATGTTCCCATCTAACATTCGTCTTGGTCTCCT
TGGCTGGAACATTGTCTTTATGGACACCGACCCTATCGACTACAGCCTACCTTCAGAGCTTGAAGGTACGGTGGATGACG
TAGAGAAGTGGCAGAAAGGCAAATACTGGGTTGCAGGCTTAGGACACTGCTCAGAGTGCCACACGCCGCGTAATATTGCG
CAAGCATTGATTCCTGAGCGCATCTTCCAAGGTAACCTGATAGACGGCTGGAACGCACCTGACATTACGTCTACGGAGCT
GTACGTTGGTGGTTGGGATGAAAAGACGTTGACCGACTTCTTACACACTGGTCATTCAGACAAAGGCACCGCGTTTGCCG
GGATGGCGGATGTCGTGAAGAACAGCTTGAGTTTAATGACGCGTGAAGACATTGAATCCATGTCCTACTACTTGCTCAGT
GGCGATGTGAACAACTTTATTGCCGCCGACGCTGTACCACTAGAGCCTCAAGGGTTCGATGACGACGCCTATCAAGAACC
AATCTACACCGTCTACAAACAGACTTGTGGCGCTTGTCACGGCAACGATGGTAAAGGGCGAGACCCAATAGCGCCAACAT
TGCTGAATAACGGCATCATAATGCACAGCGACCCGTTCAACACCATTGCGGTAACTGTGCGAGGCTTGCAACCTACCTAC
ATTGATCCAGAGCGTAATTTCATGCCGATGGCGAGCTTTGAGGACATCCTCTCCGACGCACGTTTAGCAGAGTTAATTAC
CTTTGTGCGCAAACACCTCGGAGACCAACAAGAAGCAGTTACTGCCGCTGACGTACAGGAAGTACGTGAGACGCTAGAAG
CCGCTGGATACGCAGGAGGGCTGCATACAACGCCTGATATGTACGATAGACGCGATAACAACATCAACATCCGCTAG

Upstream 100 bases:

>100_bases
TATCAGACGCGCGATTACAAATACGCGGTAAAACCAAAGCGGAAGCTCTGATTCGTTATCTTCAAAGCCTTGGTCAAGAC
ACAGCACAGGAGGTGGCACA

Downstream 100 bases:

>100_bases
TTACTGTTGAGGTGAGTTGTTGCCGAAGAAAATCGTTGATGAAGCGAATTGTTGTTTATACGAACTATTGTTGTTTAAAC
AAACTATTGCTGAATTTGTC

Product: cytochrome c

Products: NA

Alternate protein names: GA 2-DH cytochrome c subunit; GADH cytochrome c subunit [H]

Number of amino acids: Translated: 718; Mature: 717

Protein sequence:

>718_residues
MSTFWNWWAIAATIVFFILMVSVIVKYWRSNHKADQDHTIASFDGIDEKDAPPPKLLFASYAVAFLLSAGYLVLYPGLGE
WKGLANYDQSDDKLSAPSTTLDEQFSQVTDMSLDALAQNGDIVRSGHILFQTHCAACHRDNAQGQKHFPNLIDKEWMYGG
DDEALIHSIAKGRNGAMPGWVEVMRKDEVDKVAYYLASLNQRHSDVPEVKVELGKDLFVEYCSSCHGDGSIANQQTGVPD
LSDSVWLHGGSIEEIQHTINYGLNNLMPAFENQLSEHEILALGAYIRKAGEEQELKLAALNAESVKRGEYLAHAGDCVAC
HSAEGGEPFAGGLPFVTPFGTIYSTNITPHASAGIGEYDYDDFRDALVKGKGKHGYLYPAMPYTSYQYLTEQDMMDLWEY
MQSIPAVARRNDENHMMFPSNIRLGLLGWNIVFMDTDPIDYSLPSELEGTVDDVEKWQKGKYWVAGLGHCSECHTPRNIA
QALIPERIFQGNLIDGWNAPDITSTELYVGGWDEKTLTDFLHTGHSDKGTAFAGMADVVKNSLSLMTREDIESMSYYLLS
GDVNNFIAADAVPLEPQGFDDDAYQEPIYTVYKQTCGACHGNDGKGRDPIAPTLLNNGIIMHSDPFNTIAVTVRGLQPTY
IDPERNFMPMASFEDILSDARLAELITFVRKHLGDQQEAVTAADVQEVRETLEAAGYAGGLHTTPDMYDRRDNNINIR

Sequences:

>Translated_718_residues
MSTFWNWWAIAATIVFFILMVSVIVKYWRSNHKADQDHTIASFDGIDEKDAPPPKLLFASYAVAFLLSAGYLVLYPGLGE
WKGLANYDQSDDKLSAPSTTLDEQFSQVTDMSLDALAQNGDIVRSGHILFQTHCAACHRDNAQGQKHFPNLIDKEWMYGG
DDEALIHSIAKGRNGAMPGWVEVMRKDEVDKVAYYLASLNQRHSDVPEVKVELGKDLFVEYCSSCHGDGSIANQQTGVPD
LSDSVWLHGGSIEEIQHTINYGLNNLMPAFENQLSEHEILALGAYIRKAGEEQELKLAALNAESVKRGEYLAHAGDCVAC
HSAEGGEPFAGGLPFVTPFGTIYSTNITPHASAGIGEYDYDDFRDALVKGKGKHGYLYPAMPYTSYQYLTEQDMMDLWEY
MQSIPAVARRNDENHMMFPSNIRLGLLGWNIVFMDTDPIDYSLPSELEGTVDDVEKWQKGKYWVAGLGHCSECHTPRNIA
QALIPERIFQGNLIDGWNAPDITSTELYVGGWDEKTLTDFLHTGHSDKGTAFAGMADVVKNSLSLMTREDIESMSYYLLS
GDVNNFIAADAVPLEPQGFDDDAYQEPIYTVYKQTCGACHGNDGKGRDPIAPTLLNNGIIMHSDPFNTIAVTVRGLQPTY
IDPERNFMPMASFEDILSDARLAELITFVRKHLGDQQEAVTAADVQEVRETLEAAGYAGGLHTTPDMYDRRDNNINIR
>Mature_717_residues
STFWNWWAIAATIVFFILMVSVIVKYWRSNHKADQDHTIASFDGIDEKDAPPPKLLFASYAVAFLLSAGYLVLYPGLGEW
KGLANYDQSDDKLSAPSTTLDEQFSQVTDMSLDALAQNGDIVRSGHILFQTHCAACHRDNAQGQKHFPNLIDKEWMYGGD
DEALIHSIAKGRNGAMPGWVEVMRKDEVDKVAYYLASLNQRHSDVPEVKVELGKDLFVEYCSSCHGDGSIANQQTGVPDL
SDSVWLHGGSIEEIQHTINYGLNNLMPAFENQLSEHEILALGAYIRKAGEEQELKLAALNAESVKRGEYLAHAGDCVACH
SAEGGEPFAGGLPFVTPFGTIYSTNITPHASAGIGEYDYDDFRDALVKGKGKHGYLYPAMPYTSYQYLTEQDMMDLWEYM
QSIPAVARRNDENHMMFPSNIRLGLLGWNIVFMDTDPIDYSLPSELEGTVDDVEKWQKGKYWVAGLGHCSECHTPRNIAQ
ALIPERIFQGNLIDGWNAPDITSTELYVGGWDEKTLTDFLHTGHSDKGTAFAGMADVVKNSLSLMTREDIESMSYYLLSG
DVNNFIAADAVPLEPQGFDDDAYQEPIYTVYKQTCGACHGNDGKGRDPIAPTLLNNGIIMHSDPFNTIAVTVRGLQPTYI
DPERNFMPMASFEDILSDARLAELITFVRKHLGDQQEAVTAADVQEVRETLEAAGYAGGLHTTPDMYDRRDNNINIR

Specific function: Part of the heterotrimer that catalyzes the conversion of D-gluconate to 2-dehydro-D-gluconate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168
- InterPro:   IPR014353 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: =1.1.99.3 [H]

Molecular weight: Translated: 79748; Mature: 79617

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFWNWWAIAATIVFFILMVSVIVKYWRSNHKADQDHTIASFDGIDEKDAPPPKLLFAS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHH
YAVAFLLSAGYLVLYPGLGEWKGLANYDQSDDKLSAPSTTLDEQFSQVTDMSLDALAQNG
HHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
DIVRSGHILFQTHCAACHRDNAQGQKHFPNLIDKEWMYGGDDEALIHSIAKGRNGAMPGW
CEEECCCEEEEHHHHHHHCCCCCCHHHCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHH
VEVMRKDEVDKVAYYLASLNQRHSDVPEVKVELGKDLFVEYCSSCHGDGSIANQQTGVPD
HHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
LSDSVWLHGGSIEEIQHTINYGLNNLMPAFENQLSEHEILALGAYIRKAGEEQELKLAAL
CCCCEEEECCCHHHHHHHHHHCHHHCCHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEC
NAESVKRGEYLAHAGDCVACHSAEGGEPFAGGLPFVTPFGTIYSTNITPHASAGIGEYDY
CHHHHHHCCHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCH
DDFRDALVKGKGKHGYLYPAMPYTSYQYLTEQDMMDLWEYMQSIPAVARRNDENHMMFPS
HHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCC
NIRLGLLGWNIVFMDTDPIDYSLPSELEGTVDDVEKWQKGKYWVAGLGHCSECHTPRNIA
CCEEEEEEEEEEEEECCCCCCCCCHHCCCCHHHHHHHHCCCEEEEECCCCHHCCCHHHHH
QALIPERIFQGNLIDGWNAPDITSTELYVGGWDEKTLTDFLHTGHSDKGTAFAGMADVVK
HHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH
NSLSLMTREDIESMSYYLLSGDVNNFIAADAVPLEPQGFDDDAYQEPIYTVYKQTCGACH
HHHHHHHHHHHHHHEEEEEECCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
GNDGKGRDPIAPTLLNNGIIMHSDPFNTIAVTVRGLQPTYIDPERNFMPMASFEDILSDA
CCCCCCCCCCCHHHHCCCEEEECCCCCEEEEEEECCCCCEECCCCCCCCHHHHHHHHHHH
RLAELITFVRKHLGDQQEAVTAADVQEVRETLEAAGYAGGLHTTPDMYDRRDNNINIR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCC
>Mature Secondary Structure 
STFWNWWAIAATIVFFILMVSVIVKYWRSNHKADQDHTIASFDGIDEKDAPPPKLLFAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHH
YAVAFLLSAGYLVLYPGLGEWKGLANYDQSDDKLSAPSTTLDEQFSQVTDMSLDALAQNG
HHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
DIVRSGHILFQTHCAACHRDNAQGQKHFPNLIDKEWMYGGDDEALIHSIAKGRNGAMPGW
CEEECCCEEEEHHHHHHHCCCCCCHHHCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHH
VEVMRKDEVDKVAYYLASLNQRHSDVPEVKVELGKDLFVEYCSSCHGDGSIANQQTGVPD
HHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
LSDSVWLHGGSIEEIQHTINYGLNNLMPAFENQLSEHEILALGAYIRKAGEEQELKLAAL
CCCCEEEECCCHHHHHHHHHHCHHHCCHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEC
NAESVKRGEYLAHAGDCVACHSAEGGEPFAGGLPFVTPFGTIYSTNITPHASAGIGEYDY
CHHHHHHCCHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCH
DDFRDALVKGKGKHGYLYPAMPYTSYQYLTEQDMMDLWEYMQSIPAVARRNDENHMMFPS
HHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCC
NIRLGLLGWNIVFMDTDPIDYSLPSELEGTVDDVEKWQKGKYWVAGLGHCSECHTPRNIA
CCEEEEEEEEEEEEECCCCCCCCCHHCCCCHHHHHHHHCCCEEEEECCCCHHCCCHHHHH
QALIPERIFQGNLIDGWNAPDITSTELYVGGWDEKTLTDFLHTGHSDKGTAFAGMADVVK
HHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH
NSLSLMTREDIESMSYYLLSGDVNNFIAADAVPLEPQGFDDDAYQEPIYTVYKQTCGACH
HHHHHHHHHHHHHHEEEEEECCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
GNDGKGRDPIAPTLLNNGIIMHSDPFNTIAVTVRGLQPTYIDPERNFMPMASFEDILSDA
CCCCCCCCCCCHHHHCCCEEEECCCCCEEEEEEECCCCCEECCCCCCCCHHHHHHHHHHH
RLAELITFVRKHLGDQQEAVTAADVQEVRETLEAAGYAGGLHTTPDMYDRRDNNINIR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9352901 [H]