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The map label for this gene is torC [H]

Identifier: 156976677

GI number: 156976677

Start: 667540

End: 668625

Strand: Direct

Name: torC [H]

Synonym: VIBHAR_05451

Alternate gene names: 156976677

Gene position: 667540-668625 (Clockwise)

Preceding gene: 156976674

Following gene: 156976678

Centisome position: 30.29

GC content: 41.16

Gene sequence:

>1086_bases
ATGAAGAAGTTTATTATTTTTGCAGTAGCCGCTTTTGCAGTTTCATTTTTAGTAATTAAAAGCGGTGAAGAAATACTACA
TGAAACTTCCACAACTGAGTTTTGTGTGTCCTGCCATTCAATGGAGATACCAGCGGAAGAGTTTGAGTCTACTGCGCATT
TCTCTAATTCATTTGGTGTCCGTGTGGAGTGTAAAGATTGTCACATTAATGAATACGACATGATTGATTACGTAAAGGCT
AAGCTCGGTGGTGCCAAGGATATCTGGTATGAACTAACAGGAGAGATAGATACTCCTGAAAAATATGAGGAACATCGATT
GGAAATGGCTCAGGCGGTTTGGGCTACGATGGAGGCCAATAATTCAGCCACCTGTAAGCATTGCCATTCTTATGACAGTA
TGAATTGGGATGAAATGTCTGTGGCTGCCAAAACTGCGATGATGCCGGCGGCCAAAAAAGACCAAGGTTGTATCGACTGT
CACAAGGGTATTGCTCATCACCTACCTAAGGTTCAATCTGACTCGACTGCTCTTAGTAAGCTTGAAATTAATGAGACGGT
ATACACTACCACTACTTCTACGATTTATAACGAAAAGAGCTTGCAGGATAAGAGCCGAGCAAAAATGTTACCTCTTACCA
AGCTAACCTTACTTGAGAAAGATGAGAAAGCTTTTAAGGTTAAGTTGTCTGGATGGCAAGAAGGGAGAAAAAAGCTTCTT
TATGCTGAAAAAGGGCTGCGAATTACTGATGCGACGTTGCGAGGTATTAAAGACATTAAAGAAACCGGTGAAACGTATTA
TGACGATGCAACTAAAAAAGACTGGAAGGGTATAGAGGTCATAGCCTGGATCGGTGATACACAGATTATTCAGGACTTGG
GTACCGAATATGAGGGGTTAGCATTTCAGTACGATGCTAAGTGTGGTGCTTGTCATACAAAAGTTGAGGAGAGTCACTTC
AAAGCGAATGATTGGCCTGCTCAATTTAAAGGGATGTCTAGACAGGCGAAGCTTGAGAAAAATGAAAGTTACAAGCTGTT
GAAGTACTTACAGTACCACTCTGCTGATTTTGCTAGTAACCATTGA

Upstream 100 bases:

>100_bases
AGCTTACATCCTGGTGAGAAACGACTGCTAGGCACTTAAAAGAATAAGATGAGCTGTCTGGTGGCCAACACCAAATTGTA
ATGGAAGACGGGGCTTATTT

Downstream 100 bases:

>100_bases
TAAATGGACTATTGAACTCATCACATAATGAATAAGGAAAAAATATGGAACTTTCTCGTAGAAGCTTTTTGAAATCAGCA
GGGGTTGCCAGTACGGCAGC

Product: cytochrome c protein, subunit of nitrate reductase

Products: H2O; trimethylamine; NAD [C]

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MKKFIIFAVAAFAVSFLVIKSGEEILHETSTTEFCVSCHSMEIPAEEFESTAHFSNSFGVRVECKDCHINEYDMIDYVKA
KLGGAKDIWYELTGEIDTPEKYEEHRLEMAQAVWATMEANNSATCKHCHSYDSMNWDEMSVAAKTAMMPAAKKDQGCIDC
HKGIAHHLPKVQSDSTALSKLEINETVYTTTTSTIYNEKSLQDKSRAKMLPLTKLTLLEKDEKAFKVKLSGWQEGRKKLL
YAEKGLRITDATLRGIKDIKETGETYYDDATKKDWKGIEVIAWIGDTQIIQDLGTEYEGLAFQYDAKCGACHTKVEESHF
KANDWPAQFKGMSRQAKLEKNESYKLLKYLQYHSADFASNH

Sequences:

>Translated_361_residues
MKKFIIFAVAAFAVSFLVIKSGEEILHETSTTEFCVSCHSMEIPAEEFESTAHFSNSFGVRVECKDCHINEYDMIDYVKA
KLGGAKDIWYELTGEIDTPEKYEEHRLEMAQAVWATMEANNSATCKHCHSYDSMNWDEMSVAAKTAMMPAAKKDQGCIDC
HKGIAHHLPKVQSDSTALSKLEINETVYTTTTSTIYNEKSLQDKSRAKMLPLTKLTLLEKDEKAFKVKLSGWQEGRKKLL
YAEKGLRITDATLRGIKDIKETGETYYDDATKKDWKGIEVIAWIGDTQIIQDLGTEYEGLAFQYDAKCGACHTKVEESHF
KANDWPAQFKGMSRQAKLEKNESYKLLKYLQYHSADFASNH
>Mature_361_residues
MKKFIIFAVAAFAVSFLVIKSGEEILHETSTTEFCVSCHSMEIPAEEFESTAHFSNSFGVRVECKDCHINEYDMIDYVKA
KLGGAKDIWYELTGEIDTPEKYEEHRLEMAQAVWATMEANNSATCKHCHSYDSMNWDEMSVAAKTAMMPAAKKDQGCIDC
HKGIAHHLPKVQSDSTALSKLEINETVYTTTTSTIYNEKSLQDKSRAKMLPLTKLTLLEKDEKAFKVKLSGWQEGRKKLL
YAEKGLRITDATLRGIKDIKETGETYYDDATKKDWKGIEVIAWIGDTQIIQDLGTEYEGLAFQYDAKCGACHTKVEESHF
KANDWPAQFKGMSRQAKLEKNESYKLLKYLQYHSADFASNH

Specific function: Part of the anaerobic respiratory chain of trimethylamine-N-oxide reductase TorA. Acts by transferring electrons from the membranous menaquinones to TorA. This transfer probably involves an electron transfer pathway from menaquinones to the N-terminal dom

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TorC/TorY family [H]

Homologues:

Organism=Escherichia coli, GI1787230, Length=365, Percent_Identity=37.2602739726027, Blast_Score=236, Evalue=2e-63,
Organism=Escherichia coli, GI1788181, Length=357, Percent_Identity=36.6946778711485, Blast_Score=228, Evalue=3e-61,
Organism=Escherichia coli, GI1788530, Length=149, Percent_Identity=42.2818791946309, Blast_Score=125, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009154
- InterPro:   IPR011031
- InterPro:   IPR005126 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 40980; Mature: 40980

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFIIFAVAAFAVSFLVIKSGEEILHETSTTEFCVSCHSMEIPAEEFESTAHFSNSFGV
CCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCE
RVECKDCHINEYDMIDYVKAKLGGAKDIWYELTGEIDTPEKYEEHRLEMAQAVWATMEAN
EEEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC
NSATCKHCHSYDSMNWDEMSVAAKTAMMPAAKKDQGCIDCHKGIAHHLPKVQSDSTALSK
CCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHE
LEINETVYTTTTSTIYNEKSLQDKSRAKMLPLTKLTLLEKDEKAFKVKLSGWQEGRKKLL
EEECCEEEEEEHHHHCCCHHHCHHHHHHCCCCHHHHHCCCCCCEEEEEECCHHHHHHHHH
YAEKGLRITDATLRGIKDIKETGETYYDDATKKDWKGIEVIAWIGDTQIIQDLGTEYEGL
HHHCCCEEEHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEEEEECCHHHHHHHCCCCCCE
AFQYDAKCGACHTKVEESHFKANDWPAQFKGMSRQAKLEKNESYKLLKYLQYHSADFASN
EEEECCCCCCHHHHHHHHCCCCCCCCHHHCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCC
H
C
>Mature Secondary Structure
MKKFIIFAVAAFAVSFLVIKSGEEILHETSTTEFCVSCHSMEIPAEEFESTAHFSNSFGV
CCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCE
RVECKDCHINEYDMIDYVKAKLGGAKDIWYELTGEIDTPEKYEEHRLEMAQAVWATMEAN
EEEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC
NSATCKHCHSYDSMNWDEMSVAAKTAMMPAAKKDQGCIDCHKGIAHHLPKVQSDSTALSK
CCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHE
LEINETVYTTTTSTIYNEKSLQDKSRAKMLPLTKLTLLEKDEKAFKVKLSGWQEGRKKLL
EEECCEEEEEEHHHHCCCHHHCHHHHHHCCCCHHHHHCCCCCCEEEEEECCHHHHHHHHH
YAEKGLRITDATLRGIKDIKETGETYYDDATKKDWKGIEVIAWIGDTQIIQDLGTEYEGL
HHHCCCEEEHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEEEEECCHHHHHHHCCCCCCE
AFQYDAKCGACHTKVEESHFKANDWPAQFKGMSRQAKLEKNESYKLLKYLQYHSADFASN
EEEECCCCCCHHHHHHHHCCCCCCCCHHHCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCC
H
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: trimethylamine-N-oxide; NADH [C]

Specific reaction: trimethylamine-N-oxide + NADH = H2O + trimethylamine + NAD [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]