Click here to switch to the map view.

The map label for this gene is 156976643

Identifier: 156976643

GI number: 156976643

Start: 638923

End: 639816

Strand: Reverse

Name: 156976643

Synonym: VIBHAR_05417

Alternate gene names: NA

Gene position: 639816-638923 (Counterclockwise)

Preceding gene: 156976644

Following gene: 156976641

Centisome position: 29.03

GC content: 44.85

Gene sequence:

>894_bases
ATGTGTGACAGGACAAGCAAAAACGAAAACAGTATCTTAACCTTCTCAGCCCTTTTAGCATCAGGGTTTGCTGTCGGAGG
CATGGTACTTGGCTTGCTTGTTGGGTCGATCGTCATTGTATTTGACGGTGTTTATTCTCTAGTCAGTCTGCTGTTAACTT
TATTGTCGCTGGCAGCATCTTACTACATCAGCAAGCCATCAAAATCTATTTTCCCTTTCGGCAAAGCTGTACTTGAACCT
ATCGTTATCGCTATCAAAGCAGCCGTTATTTTAGTTGTTGTTGCTTTCTCATTATTCTCTGCGGTAACGGCGTTGATGAC
AGGCGGTCGTGAGGTAGACGCTTCCATCGCGACCATCTTTGGTGTGGTTAACGTTGTTGGTTGTGGTTACGCTTGGTGGT
TTATGGCGAAGAAAAGCCGTCGTTTTTCATCTGGTTTAATCGAAGCCGAGAAAAAGCAATGGCAAATGGATACGCTATTG
AGTATCGCTGTCACTGCAGGTTTCATCGCCGCATGGTTAGTATCATTAACGCCATACGCCCACTACGCAGTGTATGCAGA
CCCTATGATGATGGTTTTGATGGGCTTCTACTTCCTTAAAGTACCTTTTGATATGCTAGTTGGTGCCCTACGCGAACTGC
TAATGATGACACCTAGCAAAGAGTTGTGTCAGAGCGTTGGTAAAGACGTTCTTGAGATTGAAAAGGTAACTGAGCACCAA
TTGAAACTGGCTGGGGTAACTAAAGTTGGTCAGGAACTGCGAGTAAATGTGGACGTGCATGTAGATGACGACACACTAGA
GCTTGATACGCTAGAGCACACTCGTAAGCAGCTTACTAAGCGACTATCGAAGCACAGATTCAAGCTTCAGTTACAGTTGA
ACGTCGCTTATTAG

Upstream 100 bases:

>100_bases
CAGAACAAGCATTTTATCGTTTAAATGTCACACAGTTTTTATTTGCTTAAATTTGCCCTGAGGAAAAGAATGTAAGGGTG
TAATAATTTAAGGCATCTTT

Downstream 100 bases:

>100_bases
AGCACCACCAAGAATCATTAGAACTCAAAACAAAAGCTCCCACCCTCGGGAGCTTTTTTCATTTCTTCAGTTAGTGAGCT
TGCAGCCCCCTCCAACTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: Cation Efflux Protein; Cobalt-Zinc-Cadmium Resistance Protein; Cation Efflux Family Protein; Cation Transporter-Like Membrane Protein; Co/Zn/Cd Cation Transporter; Cation Efflux Pump; Cation Efflux System Protein; Cobalt-Zinc-Cadmium Resistance Protein CzcD; Cation Efflux System Component

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MCDRTSKNENSILTFSALLASGFAVGGMVLGLLVGSIVIVFDGVYSLVSLLLTLLSLAASYYISKPSKSIFPFGKAVLEP
IVIAIKAAVILVVVAFSLFSAVTALMTGGREVDASIATIFGVVNVVGCGYAWWFMAKKSRRFSSGLIEAEKKQWQMDTLL
SIAVTAGFIAAWLVSLTPYAHYAVYADPMMMVLMGFYFLKVPFDMLVGALRELLMMTPSKELCQSVGKDVLEIEKVTEHQ
LKLAGVTKVGQELRVNVDVHVDDDTLELDTLEHTRKQLTKRLSKHRFKLQLQLNVAY

Sequences:

>Translated_297_residues
MCDRTSKNENSILTFSALLASGFAVGGMVLGLLVGSIVIVFDGVYSLVSLLLTLLSLAASYYISKPSKSIFPFGKAVLEP
IVIAIKAAVILVVVAFSLFSAVTALMTGGREVDASIATIFGVVNVVGCGYAWWFMAKKSRRFSSGLIEAEKKQWQMDTLL
SIAVTAGFIAAWLVSLTPYAHYAVYADPMMMVLMGFYFLKVPFDMLVGALRELLMMTPSKELCQSVGKDVLEIEKVTEHQ
LKLAGVTKVGQELRVNVDVHVDDDTLELDTLEHTRKQLTKRLSKHRFKLQLQLNVAY
>Mature_297_residues
MCDRTSKNENSILTFSALLASGFAVGGMVLGLLVGSIVIVFDGVYSLVSLLLTLLSLAASYYISKPSKSIFPFGKAVLEP
IVIAIKAAVILVVVAFSLFSAVTALMTGGREVDASIATIFGVVNVVGCGYAWWFMAKKSRRFSSGLIEAEKKQWQMDTLL
SIAVTAGFIAAWLVSLTPYAHYAVYADPMMMVLMGFYFLKVPFDMLVGALRELLMMTPSKELCQSVGKDVLEIEKVTEHQ
LKLAGVTKVGQELRVNVDVHVDDDTLELDTLEHTRKQLTKRLSKHRFKLQLQLNVAY

Specific function: Unknown

COG id: COG3965

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32615; Mature: 32615

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCHHHEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHEEEEEEEEECC
>Mature Secondary Structure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HHHHHHHHHCHHHEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA