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The map label for this gene is pepT [H]

Identifier: 156976610

GI number: 156976610

Start: 610537

End: 611778

Strand: Direct

Name: pepT [H]

Synonym: VIBHAR_05384

Alternate gene names: 156976610

Gene position: 610537-611778 (Clockwise)

Preceding gene: 156976609

Following gene: 156976612

Centisome position: 27.7

GC content: 46.3

Gene sequence:

>1242_bases
ATGAGAATAATTATGAAGCATTTAGTTGAAAGATTTCTTCGCTACGTCACGTTCGATACTCAATCTAACCCCCATGAATC
AGCTTGTCCAAGTAGCAGCGGACAACTGGTGTTTGCACAGTTGCTTAAAAAAGAAATGATTGAGCTTGGCTTAAGCAATG
TGACATTAAGTGATAACGGCTACCTAATGGCAAAACTGCCATCGAACGTTGATTATGATGTGCCTGCTATTGGCTTTATC
GCACACATGGATACCGCCCCTGATGCGTCTGGTAAAAATGTGAACCCTCAGTTTATCGAAGACTATCAGGGTGGTGATAT
TGCACTTGGTTTGGGCGATGAAGTGCTTTCTCCAGTGCAGTATCCAGACTTACACGAGCTTCATGGTCATAATCTGATTA
CTACAGATGGCACAACACTCCTAGGTGCAGACAACAAAGCAGGCATTGCTGAGATTCTTTCTGCGGTCGCGATGCTGATT
GAAAATCCAGACATCCCACACGGTGATATTTGTATTGGCTTCACGCCAGATGAAGAGATCGGTCGTGGCGCTGACTTGTT
TGATGTTGAGAAGTTCGGCGCGGAGTGGGCGTACACCATCGATGGTGGCCCTCAAGGCGAGCTGGAATACGAAAACTTCA
ATGCAACCAGTGCGGATGTCACTTTCCATGGCGTGAGCGTTCATCCAGGCACTGCGAAAGGCAAACTGGTTAATGCGATG
AACTTGGCGGCTAAATTCCAAGTGCAGATGCCAGAAGATCAAACGCCAGAAACTACAGAAGGCTACGAAGGCTTCTTCCA
CCTAAAATCTGGTGAACTTGGTGTGGCTCGTAGTGAGTTAGGCTACATCATTCGTGACTTTGACCGCGAAGGTCTGGAAA
ATCGCAAAGCCTATATGCAGAAGCTAGTCGATGATATGAACGCAGGCTTGAAGCACGGTTCTGTTGAGTTGAAGCTCACT
GACAGCTATTACAACATGCGTGAAATGGTTGAACCATATCCACATATTATCGATTTGGCGAAACAAGCGATGGAAGTGTG
CAATGTTGAGCCTCTTATTAAGCCAATTCGTGGTGGTACAGACGGTGCCCGTTTGTCGTTTATGGGCTTGCCTTGTCCGA
ACATCTTCACAGGTGGCTACAACTTCCACGGTATCCATGAATTTATCTCCGTAGAGATGATGGAGAAGTCTGTTCAAGTG
ATCGTTAAGATTGCTGAGCTAACGGCCAAGAAGCACGGTTAA

Upstream 100 bases:

>100_bases
TCTTATTGCAGCATGAGCGTAACATGGCTTGTCGAACCATGTTGGTTAGGATCCTCGCACATCTAGCATCCCAGTGCGCC
GCATCCTTTGCCCAAAAACA

Downstream 100 bases:

>100_bases
TCGCGCTAATTAATTAACCTCACCACAGAGAAAAACAAAAGCCCAGACGACTGTCTGGGCTTTTTGGTTGGTTTTGGCAA
ACGTTTAGATTGTCTGAACA

Product: peptidase T

Products: NA

Alternate protein names: Aminotripeptidase; Tripeptidase; Tripeptide aminopeptidase [H]

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MRIIMKHLVERFLRYVTFDTQSNPHESACPSSSGQLVFAQLLKKEMIELGLSNVTLSDNGYLMAKLPSNVDYDVPAIGFI
AHMDTAPDASGKNVNPQFIEDYQGGDIALGLGDEVLSPVQYPDLHELHGHNLITTDGTTLLGADNKAGIAEILSAVAMLI
ENPDIPHGDICIGFTPDEEIGRGADLFDVEKFGAEWAYTIDGGPQGELEYENFNATSADVTFHGVSVHPGTAKGKLVNAM
NLAAKFQVQMPEDQTPETTEGYEGFFHLKSGELGVARSELGYIIRDFDREGLENRKAYMQKLVDDMNAGLKHGSVELKLT
DSYYNMREMVEPYPHIIDLAKQAMEVCNVEPLIKPIRGGTDGARLSFMGLPCPNIFTGGYNFHGIHEFISVEMMEKSVQV
IVKIAELTAKKHG

Sequences:

>Translated_413_residues
MRIIMKHLVERFLRYVTFDTQSNPHESACPSSSGQLVFAQLLKKEMIELGLSNVTLSDNGYLMAKLPSNVDYDVPAIGFI
AHMDTAPDASGKNVNPQFIEDYQGGDIALGLGDEVLSPVQYPDLHELHGHNLITTDGTTLLGADNKAGIAEILSAVAMLI
ENPDIPHGDICIGFTPDEEIGRGADLFDVEKFGAEWAYTIDGGPQGELEYENFNATSADVTFHGVSVHPGTAKGKLVNAM
NLAAKFQVQMPEDQTPETTEGYEGFFHLKSGELGVARSELGYIIRDFDREGLENRKAYMQKLVDDMNAGLKHGSVELKLT
DSYYNMREMVEPYPHIIDLAKQAMEVCNVEPLIKPIRGGTDGARLSFMGLPCPNIFTGGYNFHGIHEFISVEMMEKSVQV
IVKIAELTAKKHG
>Mature_413_residues
MRIIMKHLVERFLRYVTFDTQSNPHESACPSSSGQLVFAQLLKKEMIELGLSNVTLSDNGYLMAKLPSNVDYDVPAIGFI
AHMDTAPDASGKNVNPQFIEDYQGGDIALGLGDEVLSPVQYPDLHELHGHNLITTDGTTLLGADNKAGIAEILSAVAMLI
ENPDIPHGDICIGFTPDEEIGRGADLFDVEKFGAEWAYTIDGGPQGELEYENFNATSADVTFHGVSVHPGTAKGKLVNAM
NLAAKFQVQMPEDQTPETTEGYEGFFHLKSGELGVARSELGYIIRDFDREGLENRKAYMQKLVDDMNAGLKHGSVELKLT
DSYYNMREMVEPYPHIIDLAKQAMEVCNVEPLIKPIRGGTDGARLSFMGLPCPNIFTGGYNFHGIHEFISVEMMEKSVQV
IVKIAELTAKKHG

Specific function: Cleaves the N-terminal amino acid of tripeptides [H]

COG id: COG2195

COG function: function code E; Di- and tripeptidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20B family [H]

Homologues:

Organism=Escherichia coli, GI1787372, Length=408, Percent_Identity=61.0294117647059, Blast_Score=522, Evalue=1e-149,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR002933
- InterPro:   IPR011650
- InterPro:   IPR010161 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.4.11.4 [H]

Molecular weight: Translated: 45356; Mature: 45356

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS00758 ARGE_DAPE_CPG2_1 ; PS00759 ARGE_DAPE_CPG2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIIMKHLVERFLRYVTFDTQSNPHESACPSSSGQLVFAQLLKKEMIELGLSNVTLSDNG
CHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCC
YLMAKLPSNVDYDVPAIGFIAHMDTAPDASGKNVNPQFIEDYQGGDIALGLGDEVLSPVQ
EEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCCEEEEECCHHHHCCCC
YPDLHELHGHNLITTDGTTLLGADNKAGIAEILSAVAMLIENPDIPHGDICIGFTPDEEI
CCCCHHHCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHH
GRGADLFDVEKFGAEWAYTIDGGPQGELEYENFNATSADVTFHGVSVHPGTAKGKLVNAM
CCCCCEEHHHHCCCCEEEEECCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCHHHHHH
NLAAKFQVQMPEDQTPETTEGYEGFFHLKSGELGVARSELGYIIRDFDREGLENRKAYMQ
HHEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
KLVDDMNAGLKHGSVELKLTDSYYNMREMVEPYPHIIDLAKQAMEVCNVEPLIKPIRGGT
HHHHHHHCCCCCCEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHCCCC
DGARLSFMGLPCPNIFTGGYNFHGIHEFISVEMMEKSVQVIVKIAELTAKKHG
CCCEEEEECCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRIIMKHLVERFLRYVTFDTQSNPHESACPSSSGQLVFAQLLKKEMIELGLSNVTLSDNG
CHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCC
YLMAKLPSNVDYDVPAIGFIAHMDTAPDASGKNVNPQFIEDYQGGDIALGLGDEVLSPVQ
EEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCCEEEEECCHHHHCCCC
YPDLHELHGHNLITTDGTTLLGADNKAGIAEILSAVAMLIENPDIPHGDICIGFTPDEEI
CCCCHHHCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHH
GRGADLFDVEKFGAEWAYTIDGGPQGELEYENFNATSADVTFHGVSVHPGTAKGKLVNAM
CCCCCEEHHHHCCCCEEEEECCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCHHHHHH
NLAAKFQVQMPEDQTPETTEGYEGFFHLKSGELGVARSELGYIIRDFDREGLENRKAYMQ
HHEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
KLVDDMNAGLKHGSVELKLTDSYYNMREMVEPYPHIIDLAKQAMEVCNVEPLIKPIRGGT
HHHHHHHCCCCCCEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHCCCC
DGARLSFMGLPCPNIFTGGYNFHGIHEFISVEMMEKSVQVIVKIAELTAKKHG
CCCEEEEECCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]