Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976609

Identifier: 156976609

GI number: 156976609

Start: 609495

End: 610355

Strand: Direct

Name: 156976609

Synonym: VIBHAR_05383

Alternate gene names: NA

Gene position: 609495-610355 (Clockwise)

Preceding gene: 156976607

Following gene: 156976610

Centisome position: 27.65

GC content: 38.56

Gene sequence:

>861_bases
ATGAAATTAAAAAGTTTATCTAATAAAGCGGTTCGATATGGATGTATCTTGATATCTATTTTGGTGTTAGCCGGGTGTGC
TAAAAAATTTCTATACAGTAACCTTGATTGGGTAGTGATTGAATATTTAGATGACTATGTCTCCCTAGATGGAGAACAAG
AGGCGTTGCTGGAAGAGCGTATATTATTATTAGCGGATTGGCATAAAGAAGAGGAATTACCTTTATATATCGATCACTTA
AAACAATTAGAAGCGCTTAATAAAGACAGCGTTACGTTGGGCGCTTTGCAATCGAACCGAGAACAAATGCGCGACCACTA
TCAACGTTTGGTTTCCAAAGCGGCACCAGACCTGTTTTCACTGAGTATGCAGCTCGACAGAAAACAAGAAATCGAGTTTA
TCGATAGTGTAAAAGAACGTTACAAAGAGCGGGATGAAAAATACGCAGGTAAAACGGAACAAGAGCTGCGAGAAGTTGTC
TTAGATAATACTGAAGAGTGGATGGAAGAATGGCTTGGTAAATTATCAAGACAACAAAAAGCACGCGCCAAACAGCTTTC
TGAGAATGTGATCGTAAATAGTCCACTATGGCGTGACTATCGCTCGTCTATAATTCAAGAACTCGAATACCTTTTCGAAA
ATAAAAGTAACAGCGTGGTTTACCAGCAGGTATTCATGAAACTCTTATTTGAGCCAGAAAGTTATTATAGTGATCAACTA
ACCAAGAATATTGATCATAATATTGCACTAACGGATCAATTCACCCTAGATATTTCCCAAACAATGAGTGATAAACAGTG
GCGACACTTCCACGGAAAAGTCCGTGAGTGGCGAGAGCTTGCTGAAGACTTATTGAATTAA

Upstream 100 bases:

>100_bases
GCAATGTAACTTTGCCGGACTGACGAAAGTTTGCCGCAATAATAAGTGATTTAGATTGAGTATAGAACTTAATCAATAAA
AAAGGGAATATGGATCGGTG

Downstream 100 bases:

>100_bases
TTCCCTATAAAACAAACTCTTAATGTGAGTGCTGATGGAGCCTGTCAGCACTTTCTAATGAAAAACTGATTCAAAGCAAT
TTCTTATTGCAGCATGAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MKLKSLSNKAVRYGCILISILVLAGCAKKFLYSNLDWVVIEYLDDYVSLDGEQEALLEERILLLADWHKEEELPLYIDHL
KQLEALNKDSVTLGALQSNREQMRDHYQRLVSKAAPDLFSLSMQLDRKQEIEFIDSVKERYKERDEKYAGKTEQELREVV
LDNTEEWMEEWLGKLSRQQKARAKQLSENVIVNSPLWRDYRSSIIQELEYLFENKSNSVVYQQVFMKLLFEPESYYSDQL
TKNIDHNIALTDQFTLDISQTMSDKQWRHFHGKVREWRELAEDLLN

Sequences:

>Translated_286_residues
MKLKSLSNKAVRYGCILISILVLAGCAKKFLYSNLDWVVIEYLDDYVSLDGEQEALLEERILLLADWHKEEELPLYIDHL
KQLEALNKDSVTLGALQSNREQMRDHYQRLVSKAAPDLFSLSMQLDRKQEIEFIDSVKERYKERDEKYAGKTEQELREVV
LDNTEEWMEEWLGKLSRQQKARAKQLSENVIVNSPLWRDYRSSIIQELEYLFENKSNSVVYQQVFMKLLFEPESYYSDQL
TKNIDHNIALTDQFTLDISQTMSDKQWRHFHGKVREWRELAEDLLN
>Mature_286_residues
MKLKSLSNKAVRYGCILISILVLAGCAKKFLYSNLDWVVIEYLDDYVSLDGEQEALLEERILLLADWHKEEELPLYIDHL
KQLEALNKDSVTLGALQSNREQMRDHYQRLVSKAAPDLFSLSMQLDRKQEIEFIDSVKERYKERDEKYAGKTEQELREVV
LDNTEEWMEEWLGKLSRQQKARAKQLSENVIVNSPLWRDYRSSIIQELEYLFENKSNSVVYQQVFMKLLFEPESYYSDQL
TKNIDHNIALTDQFTLDISQTMSDKQWRHFHGKVREWRELAEDLLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33952; Mature: 33952

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA