| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976599
Identifier: 156976599
GI number: 156976599
Start: 600143
End: 600514
Strand: Direct
Name: 156976599
Synonym: VIBHAR_05373
Alternate gene names: NA
Gene position: 600143-600514 (Clockwise)
Preceding gene: 156976598
Following gene: 156976600
Centisome position: 27.23
GC content: 47.58
Gene sequence:
>372_bases ATGATTTTTAGTATAATAAATGCAATGAAAAAGACGCCAAATATTAACCCAGAAAGCCAAGATGTTGCCAAGCTACAAGC GATGGTGAAAGCCCTTCTGCTCTCTCAGGAGCGGAAGGAGTCTCAATGGAAACAAGAGCGTCAATCCTTACTCGAACAGC TCAAGCTGGCCTTCGACCGTCAGTTCGCGAAACGCTCCGAGGCGCTAAAGCCTTACGATGAATCTCAAGGTGACCTCTTC AACGAAGTGGAATGTGAAGCCGCTAAGGAAGAAGAGGTGAAGTGGTCACGACGACCACTACAACGAAGAAGCGTGGTAAA CGCAAGCCCCTTCCAAAGACTTTGCCTCGTGAGGTTATCGAACTCGATTTAG
Upstream 100 bases:
>100_bases GCTTTCTGGCTTCACGATTATCGGCCATAAACCCGTTCAAATAAACGATTTTACAATGACTTAATCGATAATAAAGCCTT ATCTACCAAGCGTTAACGGC
Downstream 100 bases:
>100_bases ACGACCATGAAAAACAGTGTGCCTGCTGCCAACATAGTCTGCATAAAATCGGTGAAGACCGCAGTGAGAAACTTGAGTTC TCACCAGCTGTGCTCAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MIFSIINAMKKTPNINPESQDVAKLQAMVKALLLSQERKESQWKQERQSLLEQLKLAFDRQFAKRSEALKPYDESQGDLF NEVECEAAKEEEVKWSRRPLQRRSVVNASPFQRLCLVRLSNSI
Sequences:
>Translated_123_residues MIFSIINAMKKTPNINPESQDVAKLQAMVKALLLSQERKESQWKQERQSLLEQLKLAFDRQFAKRSEALKPYDESQGDLF NEVECEAAKEEEVKWSRRPLQRRSVVNASPFQRLCLVRLSNSI >Mature_123_residues MIFSIINAMKKTPNINPESQDVAKLQAMVKALLLSQERKESQWKQERQSLLEQLKLAFDRQFAKRSEALKPYDESQGDLF NEVECEAAKEEEVKWSRRPLQRRSVVNASPFQRLCLVRLSNSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14338; Mature: 14338
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFSIINAMKKTPNINPESQDVAKLQAMVKALLLSQERKESQWKQERQSLLEQLKLAFDR CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFAKRSEALKPYDESQGDLFNEVECEAAKEEEVKWSRRPLQRRSVVNASPFQRLCLVRLS HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH NSI CCC >Mature Secondary Structure MIFSIINAMKKTPNINPESQDVAKLQAMVKALLLSQERKESQWKQERQSLLEQLKLAFDR CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFAKRSEALKPYDESQGDLFNEVECEAAKEEEVKWSRRPLQRRSVVNASPFQRLCLVRLS HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH NSI CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA