Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976581

Identifier: 156976581

GI number: 156976581

Start: 585640

End: 586566

Strand: Reverse

Name: 156976581

Synonym: VIBHAR_05355

Alternate gene names: NA

Gene position: 586566-585640 (Counterclockwise)

Preceding gene: 156976584

Following gene: 156976580

Centisome position: 26.61

GC content: 47.14

Gene sequence:

>927_bases
ATGGCACTTGGATACGCTGCAATCATTACAACGCTTTTTCTTTGGTCAGGATTTTTTCTCTCTCTGCGCGGAGGCGCAAT
ATCAGATCTTCAGCCTGCAGACATCGCTTTAGCACGCTTTCTTATTCCTGCCGCGGTATTACTGCCGTTTGTGCTCAAGT
CCATGAACCAAATACGCGCGGTGCCAAGTAAGTATTTACTCGGCATCATTGTAGGCAGTGGTCTGCCTTATCTTCTGATT
GCAGGTACTGCGATGCACTATGCGCCTGTTTCTCATGGCAGTGCTTTAATTCCAGGGACGTTACCGCTATTTGTCTCTGC
TATCGCTGTCTTGTGTTATCAGCAACCATTGAGTCAACATCGCGTTATTGGCTTATCAGCCGTATTACTTGGCATTCTGG
TGTTTTTACTGTCCAACTTAGGGGCCGAATATAACTGGCTACAACTTAAGGGACACAGCTTATTTTTGGTTGGCAGCCTG
ATGTGGGCAATCTTTACGATTAGTGCGCGCGTGGCGAACTTAAACGCCTATGTTTGCGCAGGTTTTGTATCGGTCATTTC
TTTTGCCATGCTCGTTATCGCCGTGGGGTTTGGTTGGCTTGATAGCTACCTTGCGACAACGTCTATCAAGCAATGGCCTT
GGAATGAATTAGTTGGTCATCTACTGCTGCAAGGGGTTGGCGCAGGTCTGATTGCCTCTTTCACCTTTCTTTATGCCGTT
AGAACGATAGGAGCGGAAGCCAGTGCTGCATTTGGGTCATTAACGCCCGTATTGGCAACTTTATTAGCGATTCCAGTCTT
TAACGAACAACCTGATACTCTCACTTGGTGTGCGTTGCTGCTTGTCACCTGTGGCAGTATCGTCGCAAGTAATGTCTTGA
TGAGACAAGATCCTAGCCAAAATTATCGGCCCCCTGTTCACAGATAA

Upstream 100 bases:

>100_bases
ATTCACTAAGTTTAAGTTTTATTCGGTCATATTTTGCCACCATTGAGCGTCACTTTCATTCAATAATTAACACATCATTT
ACAAACACTCGGAATGCCTT

Downstream 100 bases:

>100_bases
GAACAAAAATGCATAACTTTTCATCTCTCCTATTGAAAGCAAAAACAGCGATTTGATAACCTACTGCGATAAGAATTTAA
AACGTCAGAAGTTATGCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane; Permease Protein; Permease; Transmembrane Protein; Permease Of Drug Metabolite Transporter Superfamily; Integral Membrane Domain Protein; Permease DMT Superfamily

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MALGYAAIITTLFLWSGFFLSLRGGAISDLQPADIALARFLIPAAVLLPFVLKSMNQIRAVPSKYLLGIIVGSGLPYLLI
AGTAMHYAPVSHGSALIPGTLPLFVSAIAVLCYQQPLSQHRVIGLSAVLLGILVFLLSNLGAEYNWLQLKGHSLFLVGSL
MWAIFTISARVANLNAYVCAGFVSVISFAMLVIAVGFGWLDSYLATTSIKQWPWNELVGHLLLQGVGAGLIASFTFLYAV
RTIGAEASAAFGSLTPVLATLLAIPVFNEQPDTLTWCALLLVTCGSIVASNVLMRQDPSQNYRPPVHR

Sequences:

>Translated_308_residues
MALGYAAIITTLFLWSGFFLSLRGGAISDLQPADIALARFLIPAAVLLPFVLKSMNQIRAVPSKYLLGIIVGSGLPYLLI
AGTAMHYAPVSHGSALIPGTLPLFVSAIAVLCYQQPLSQHRVIGLSAVLLGILVFLLSNLGAEYNWLQLKGHSLFLVGSL
MWAIFTISARVANLNAYVCAGFVSVISFAMLVIAVGFGWLDSYLATTSIKQWPWNELVGHLLLQGVGAGLIASFTFLYAV
RTIGAEASAAFGSLTPVLATLLAIPVFNEQPDTLTWCALLLVTCGSIVASNVLMRQDPSQNYRPPVHR
>Mature_307_residues
ALGYAAIITTLFLWSGFFLSLRGGAISDLQPADIALARFLIPAAVLLPFVLKSMNQIRAVPSKYLLGIIVGSGLPYLLIA
GTAMHYAPVSHGSALIPGTLPLFVSAIAVLCYQQPLSQHRVIGLSAVLLGILVFLLSNLGAEYNWLQLKGHSLFLVGSLM
WAIFTISARVANLNAYVCAGFVSVISFAMLVIAVGFGWLDSYLATTSIKQWPWNELVGHLLLQGVGAGLIASFTFLYAVR
TIGAEASAAFGSLTPVLATLLAIPVFNEQPDTLTWCALLLVTCGSIVASNVLMRQDPSQNYRPPVHR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32931; Mature: 32800

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALGYAAIITTLFLWSGFFLSLRGGAISDLQPADIALARFLIPAAVLLPFVLKSMNQIRA
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPSKYLLGIIVGSGLPYLLIAGTAMHYAPVSHGSALIPGTLPLFVSAIAVLCYQQPLSQH
CHHHHHHHHHHHCCCCEEHHHCCHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHH
RVIGLSAVLLGILVFLLSNLGAEYNWLQLKGHSLFLVGSLMWAIFTISARVANLNAYVCA
HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFVSVISFAMLVIAVGFGWLDSYLATTSIKQWPWNELVGHLLLQGVGAGLIASFTFLYAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHH
RTIGAEASAAFGSLTPVLATLLAIPVFNEQPDTLTWCALLLVTCGSIVASNVLMRQDPSQ
HHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NYRPPVHR
CCCCCCCC
>Mature Secondary Structure 
ALGYAAIITTLFLWSGFFLSLRGGAISDLQPADIALARFLIPAAVLLPFVLKSMNQIRA
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA