Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976580

Identifier: 156976580

GI number: 156976580

Start: 584884

End: 585546

Strand: Reverse

Name: 156976580

Synonym: VIBHAR_05354

Alternate gene names: NA

Gene position: 585546-584884 (Counterclockwise)

Preceding gene: 156976581

Following gene: 156976579

Centisome position: 26.57

GC content: 45.55

Gene sequence:

>663_bases
ATGCCTTCAACTCACACTAATGATGAACTGCATAAGTTCCTAAAAACAGGAATGCGAGTCTCGATTAACTTCGAGTTTGG
TCCGGAAGAAAAGTACATTTATGCTGCAAATTATCTTGGCTTAAAAGAAAACGCGTATATTATTCTCGATATACCCACTC
GCTTACTCGAAGAGCAAGCACTAAGAAAGCTCAACAATGTGGACGTTGTTATTCGCGGTGTGTCCGATACCGACCTTGGG
CACGTTGTTGCGTTTAAAACCAGTGTATTGATGAACTTGCTACGCCCTTCCCCACTGCTGTTTGTGAGGATTCCAGCCAC
TTTTGCTACGAAGCCAGTAAGAGAGCATGAGCGATATAAATTGCAATTGGCATGTACTATCGATCACATGAGCAATAGGT
ACGAAAGCAACTTAGTCGATTTCTCGCTCTCCGGTTGTGGCATTTCCACGTTGATTGAACCAGAGTTCGCCGTTGGTGAC
ACCATCACCATCGAATCTCCCCTCAGTGAGCATATCGATGAGGAAAACCGCTGCTCTGTGGCCAATATCAAAAAGCTTCA
AAAAGGTTGGATTGTCGGCGTAAAGTTCGCTGAGCCGCTCGACATGACCGACGATCTCAAGAACGAGCTCTTAGAGCACT
CCTTCTCGGCTAGCACGATTTAG

Upstream 100 bases:

>100_bases
CAGATAAGAACAAAAATGCATAACTTTTCATCTCTCCTATTGAAAGCAAAAACAGCGATTTGATAACCTACTGCGATAAG
AATTTAAAACGTCAGAAGTT

Downstream 100 bases:

>100_bases
CAATAAGCCTTAATAGGCATGAGTTTGCACAAAATAAAAAGGGAGCATTACGCTCTAATGCCGATCAGTTAAGACTTTAA
TCGGCAGATCAGTTGAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MPSTHTNDELHKFLKTGMRVSINFEFGPEEKYIYAANYLGLKENAYIILDIPTRLLEEQALRKLNNVDVVIRGVSDTDLG
HVVAFKTSVLMNLLRPSPLLFVRIPATFATKPVREHERYKLQLACTIDHMSNRYESNLVDFSLSGCGISTLIEPEFAVGD
TITIESPLSEHIDEENRCSVANIKKLQKGWIVGVKFAEPLDMTDDLKNELLEHSFSASTI

Sequences:

>Translated_220_residues
MPSTHTNDELHKFLKTGMRVSINFEFGPEEKYIYAANYLGLKENAYIILDIPTRLLEEQALRKLNNVDVVIRGVSDTDLG
HVVAFKTSVLMNLLRPSPLLFVRIPATFATKPVREHERYKLQLACTIDHMSNRYESNLVDFSLSGCGISTLIEPEFAVGD
TITIESPLSEHIDEENRCSVANIKKLQKGWIVGVKFAEPLDMTDDLKNELLEHSFSASTI
>Mature_219_residues
PSTHTNDELHKFLKTGMRVSINFEFGPEEKYIYAANYLGLKENAYIILDIPTRLLEEQALRKLNNVDVVIRGVSDTDLGH
VVAFKTSVLMNLLRPSPLLFVRIPATFATKPVREHERYKLQLACTIDHMSNRYESNLVDFSLSGCGISTLIEPEFAVGDT
ITIESPLSEHIDEENRCSVANIKKLQKGWIVGVKFAEPLDMTDDLKNELLEHSFSASTI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24840; Mature: 24709

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSTHTNDELHKFLKTGMRVSINFEFGPEEKYIYAANYLGLKENAYIILDIPTRLLEEQA
CCCCCCHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEECCCCCCCEEEEECCHHHHHHHH
LRKLNNVDVVIRGVSDTDLGHVVAFKTSVLMNLLRPSPLLFVRIPATFATKPVREHERYK
HHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHCCCCCCCCCCEE
LQLACTIDHMSNRYESNLVDFSLSGCGISTLIEPEFAVGDTITIESPLSEHIDEENRCSV
EEEEEEEHHHHCHHHCCCEEEEECCCCEEEEECCCCCCCCEEEECCCHHHHCCCCCCCCH
ANIKKLQKGWIVGVKFAEPLDMTDDLKNELLEHSFSASTI
HHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PSTHTNDELHKFLKTGMRVSINFEFGPEEKYIYAANYLGLKENAYIILDIPTRLLEEQA
CCCCCHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEECCCCCCCEEEEECCHHHHHHHH
LRKLNNVDVVIRGVSDTDLGHVVAFKTSVLMNLLRPSPLLFVRIPATFATKPVREHERYK
HHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHCCCCCCCCCCEE
LQLACTIDHMSNRYESNLVDFSLSGCGISTLIEPEFAVGDTITIESPLSEHIDEENRCSV
EEEEEEEHHHHCHHHCCCEEEEECCCCEEEEECCCCCCCCEEEECCCHHHHCCCCCCCCH
ANIKKLQKGWIVGVKFAEPLDMTDDLKNELLEHSFSASTI
HHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA