Click here to switch to the map view.

The map label for this gene is 156976495

Identifier: 156976495

GI number: 156976495

Start: 514091

End: 514462

Strand: Reverse

Name: 156976495

Synonym: VIBHAR_05268

Alternate gene names: NA

Gene position: 514462-514091 (Counterclockwise)

Preceding gene: 156976500

Following gene: 156976493

Centisome position: 23.34

GC content: 44.89

Gene sequence:

>372_bases
ATGACTCAATCAGCTTTAGAACGTGGTAAAACCGCTAGCGCAGCTTGGAAAACAGCTTTTAACAATCAAGATGCAGCAGG
TTGTGCAGCGCAGTACACTGAAGATTGCATCATGGTAGCGAAACCATTTGGCACATTTGAAGGACGCGAAGCGATCCAAG
GTTTTTGGCAACACATCATGGACCAAGGTTTTAACAGTGTCGATTACACCAACACTAAGTGGGAAAAAGACAGCGAAAAT
GGCTACATTCTTACGTCAGATTGGACGATGAACAAAGCGTTCGGCCTGGTACACAAAGAACTGTGGGAAGTTCAAGAAGA
TGGCCAGTCTCGTCTTACTTACGATGAATTTGAAGTGCTTGGCGAGCGATAA

Upstream 100 bases:

>100_bases
CTATTTAACAGAACACTTATTTCTTATTTGTTTGTTTTTCAGTTTTAATTCTAACCCTATGATTGCCACATAAACAAACA
CCAATCACAGGAAATTCAGA

Downstream 100 bases:

>100_bases
GCATTAAGCGATAGCAATAAAAAATCCCCAAGTCAGACTTGGGGATTTTTTTAAGCGAGCTTACTTATTCAGTTTTACTT
CGATTAAGCAAAGATAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Isochorismatase Family Protein

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MTQSALERGKTASAAWKTAFNNQDAAGCAAQYTEDCIMVAKPFGTFEGREAIQGFWQHIMDQGFNSVDYTNTKWEKDSEN
GYILTSDWTMNKAFGLVHKELWEVQEDGQSRLTYDEFEVLGER

Sequences:

>Translated_123_residues
MTQSALERGKTASAAWKTAFNNQDAAGCAAQYTEDCIMVAKPFGTFEGREAIQGFWQHIMDQGFNSVDYTNTKWEKDSEN
GYILTSDWTMNKAFGLVHKELWEVQEDGQSRLTYDEFEVLGER
>Mature_122_residues
TQSALERGKTASAAWKTAFNNQDAAGCAAQYTEDCIMVAKPFGTFEGREAIQGFWQHIMDQGFNSVDYTNTKWEKDSENG
YILTSDWTMNKAFGLVHKELWEVQEDGQSRLTYDEFEVLGER

Specific function: Unknown

COG id: COG4319

COG function: function code S; Ketosteroid isomerase homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14021; Mature: 13889

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSALERGKTASAAWKTAFNNQDAAGCAAQYTEDCIMVAKPFGTFEGREAIQGFWQHIM
CCHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHH
DQGFNSVDYTNTKWEKDSENGYILTSDWTMNKAFGLVHKELWEVQEDGQSRLTYDEFEVL
HCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
GER
CCC
>Mature Secondary Structure 
TQSALERGKTASAAWKTAFNNQDAAGCAAQYTEDCIMVAKPFGTFEGREAIQGFWQHIM
CHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHH
DQGFNSVDYTNTKWEKDSENGYILTSDWTMNKAFGLVHKELWEVQEDGQSRLTYDEFEVL
HCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
GER
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA