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The map label for this gene is tonB [H]

Identifier: 156976471

GI number: 156976471

Start: 494950

End: 495681

Strand: Reverse

Name: tonB [H]

Synonym: VIBHAR_05244

Alternate gene names: 156976471

Gene position: 495681-494950 (Counterclockwise)

Preceding gene: 156976477

Following gene: 156976470

Centisome position: 22.49

GC content: 47.27

Gene sequence:

>732_bases
GTGAACGTAAAAAGATATGTCATTGCCGGAGGCGCCTCTTTAGTGGTGCACGCTGCACTGCTTTTTGTCTCTCAAGAGAC
GAAGGTGTTTGCAATGCCAGCAGGTAGTCCTACTAACTCGGTAAGCCTTAATTTAGTCTCGGCTCCCAAACCAGTCCAAG
CTGAACCGACACCACAAGAAGTGGTAGAAGAAAAGCAACCAGAGCCACAAAAAAAACCTCAACCAAAGCCAGAGCCTAAG
CCGGTTAAAAAGGTCGTAAAGAAAGAAGCAGTTAAAAAGAAACCGGTTGAAACGAAACCTAAACCCGTTAAAAAACCTCA
ACCACCAAAGCCAGTTGCGAAAAAAGAGCCGCAACCCAAAGAAAAAGTGACCGAAAAAGTCGTGCAGGAACCGGTTCAAC
AGCAACAAGCGGCACCTGCGAATCAATCAAAAGGGGCGAGCGCACAGCCCGTCATGATTGATCAACCGGCTTTTGTCTCC
CAGCCAATTCAGCCACGTTACCCACGTTCAGCTCGCAAACGCGGTATTGAGGGGGTCGCTCTCTATGAGGTGTGGCTAGA
TGCAAACGGCAACCAGATTAAACAAGTGCTAATTGAATCTTCAGGCGCACAGATGCTTGATGTTTCTGCACTACGAGCCA
TCAAACAATGGCAATTCTCTCCTCATATTTCTGGTGGGCAAAAAGTTGCTCACCGAGTTCAAATCCCAGTTCGTTTTAAG
TTGGATGGATAA

Upstream 100 bases:

>100_bases
ATTTGGCCGTAATGATAATGCAATTGATAATTGATCTTATTTCTTTTGTAAGTGATAATCAGTCCAAGTTGATAATGATT
AGCAATACCGAGATTTACCC

Downstream 100 bases:

>100_bases
TGGAACAGCTACAACATTTACAAACCCAATTTGGTCTTATGACTTGGCCTTTAATGATTTGCTCTGCACTTACAGTCATG
ATCATTGCGGAAAGACTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MNVKRYVIAGGASLVVHAALLFVSQETKVFAMPAGSPTNSVSLNLVSAPKPVQAEPTPQEVVEEKQPEPQKKPQPKPEPK
PVKKVVKKEAVKKKPVETKPKPVKKPQPPKPVAKKEPQPKEKVTEKVVQEPVQQQQAAPANQSKGASAQPVMIDQPAFVS
QPIQPRYPRSARKRGIEGVALYEVWLDANGNQIKQVLIESSGAQMLDVSALRAIKQWQFSPHISGGQKVAHRVQIPVRFK
LDG

Sequences:

>Translated_243_residues
MNVKRYVIAGGASLVVHAALLFVSQETKVFAMPAGSPTNSVSLNLVSAPKPVQAEPTPQEVVEEKQPEPQKKPQPKPEPK
PVKKVVKKEAVKKKPVETKPKPVKKPQPPKPVAKKEPQPKEKVTEKVVQEPVQQQQAAPANQSKGASAQPVMIDQPAFVS
QPIQPRYPRSARKRGIEGVALYEVWLDANGNQIKQVLIESSGAQMLDVSALRAIKQWQFSPHISGGQKVAHRVQIPVRFK
LDG
>Mature_243_residues
MNVKRYVIAGGASLVVHAALLFVSQETKVFAMPAGSPTNSVSLNLVSAPKPVQAEPTPQEVVEEKQPEPQKKPQPKPEPK
PVKKVVKKEAVKKKPVETKPKPVKKPQPPKPVAKKEPQPKEKVTEKVVQEPVQQQQAAPANQSKGASAQPVMIDQPAFVS
QPIQPRYPRSARKRGIEGVALYEVWLDANGNQIKQVLIESSGAQMLDVSALRAIKQWQFSPHISGGQKVAHRVQIPVRFK
LDG

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 26610; Mature: 26610

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVKRYVIAGGASLVVHAALLFVSQETKVFAMPAGSPTNSVSLNLVSAPKPVQAEPTPQE
CCCCEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHH
VVEEKQPEPQKKPQPKPEPKPVKKVVKKEAVKKKPVETKPKPVKKPQPPKPVAKKEPQPK
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCH
EKVTEKVVQEPVQQQQAAPANQSKGASAQPVMIDQPAFVSQPIQPRYPRSARKRGIEGVA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCHHHCCCCCCCCCHHHHHCCCCCEE
LYEVWLDANGNQIKQVLIESSGAQMLDVSALRAIKQWQFSPHISGGQKVAHRVQIPVRFK
EEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHEEECEEEEE
LDG
ECC
>Mature Secondary Structure
MNVKRYVIAGGASLVVHAALLFVSQETKVFAMPAGSPTNSVSLNLVSAPKPVQAEPTPQE
CCCCEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHH
VVEEKQPEPQKKPQPKPEPKPVKKVVKKEAVKKKPVETKPKPVKKPQPPKPVAKKEPQPK
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCH
EKVTEKVVQEPVQQQQAAPANQSKGASAQPVMIDQPAFVSQPIQPRYPRSARKRGIEGVA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCHHHCCCCCCCCCHHHHHCCCCCEE
LYEVWLDANGNQIKQVLIESSGAQMLDVSALRAIKQWQFSPHISGGQKVAHRVQIPVRFK
EEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHEEECEEEEE
LDG
ECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9781885; 10952301 [H]