| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is ptk [H]
Identifier: 156976431
GI number: 156976431
Start: 459160
End: 461355
Strand: Reverse
Name: ptk [H]
Synonym: VIBHAR_05204
Alternate gene names: 156976431
Gene position: 461355-459160 (Counterclockwise)
Preceding gene: 156976432
Following gene: 156976430
Centisome position: 20.93
GC content: 42.71
Gene sequence:
>2196_bases ATGACAGGCAATTCAATGAACGAAACTCATTCTACTCAAGCCCCTACGAATCAAGTCCCCCTGATTCGTTTTGGGCATCA TTTTAGAACCCTTAAGAAGAACTGGCTGAGTATCTTAGCATTCACCATCATCTTCTCACTTACGTGTACTTGGTATATCT ACTCGAAAAAATCAGTCTACCAAGCCACTGCCACCCTTCTTATCCAAGAAGAGCAAAAAAGTGCACTTTCGATTGAGGAA GTTTACGGTGTCGACACTACGAAAAAAGAGTACTTTCAAACTCAAATCGCGATTCTTAAGTCAAACCATATCGCAGATAA AGTGATCACCAAATTGAATCTGGTTAACCATCCAGACTTCACTAGCTCAAGCGGTATTAAGCAAAAAATCGATGAAATTA AAGCGATTCCTTTCGTTCAAGATTTATTGCATGTCGCACCGAATCCAAAAGAAACCTCACAACACACAAAGCCGTATTAT CAAGCACTTCAAACATTCAAGAGAAAGCTGGATATTGAACCGGTCCGTAATACACAGTTGGTAAAAATTCGTTTTCGCTC TACCGATCCACAACTGGCGACCACCATCGCTAACGCAATAGGCCAAGCATATATCGATGCCAATTTTGAAGCGAAATTGG TTGTGACACAAAATGCAGCTACGTGGCTCACCAATAACTCGCAAAAACTAGAAGAGCGCTTAAGAGCATCAGAACAAGCA CTACAAGATTTCTTAATGCAAGAAGGCTTAATCGATATCAATGGTATCGATGACATCTATGCCAATGAGCTTGAAGAACT AAACCGTAAACTCAACGCCGCAGTAAACAATCGCATTGAAGCACAAACATTAATTCAACTGCTCAAGCGTAAATCGACAC AAGACATCGACAGCTTGCTATCGATTGATGAGTTTGCAAACCAAGCTCAAATTCGTGATTTGAAAATGTCGGAAGCCCAA GCCGCTAAAAGTGTCTCTGAGCTGTCTCAGCGCTACGGCCCTAAACATGATCGTATGATTCAAGCCAAAGCGCAATTAGC GTCTATACAAGCTCGAACTGAACAATTGATTCGAGAAATTTCGTTCAGTAAACAGCAAGACTTGCTTGCAGCAAAAGCGC AAGAAGACATGCTTCGTGCTGAGCTGGATAACAAAAAATCTGATTTCCAAATGCTAGGTTCGCAAAAGGCACGATACGAA CAACTTAAGCGTGAAGTTGAATCGAACAAAGATCTCTACGAAGCGTTCTTGAATCGCGAAAAAGAAACCAATGCCACCAG CGATTATAAGAATGTCACCGCTCGATTTACTGATCCTGCGATCGTGCCTCTGTTCCCAATCGCACCTCAGCGAATGAAAC TCGTGCTGATAGCTACCTTCTTTGGCTTTGCTATCGCTTGTGCCCTTTTGATCATCCTTGAGACACTGCGCGAAGTCATT CGTACCTCTTCTGATGTTCAAGACAAGCTCGGAGTCACCTGCTTAGGTACGATTCCGAAAGTGAAAAAGCGTGCTCTTTG CCAAAAAGGCGTTACTTACTCAGCTTATTTGGACCAAGACGAAAAGCTGTTCAGCGAAGCGTGTCGCTCCGTCCGAACCT CGTTATTGCTGAGACTAACGAACTCTAAGCAGAAAATCTTACCATTTACTTCTGCCATTCCTGAGGAAGGAAAGACATCA ACCAGTATTAATATGGCTGTCTCGTTCTCAACCATGGAAAAGGTACTGCTGATTGACTGCGACCTGCGAAAACCCTCATT AGCAAAACGCTTCAACCTTCCAGAATCAAGCCCAGGTTTAACCAACATTCTTACGATGGATACGCCTTTGAGCGAATGCA TCATCAAAAAAGAAGAGGCGAACTTAGATGTGTTGCCTGCCGGTATTATTCCACCAAATCCACAGGAGCTATTGGCATCT GACCGTTTTGAAAAACTCCTTGAGTACCTAGCGAGTAAGTATGACCGAATCATCATTGACACCCCACCTCTGCTTTCGGT AAGTGATGCTCTTATTCTTGGTCAAAAAGCCAATGGGTTGATTACTGTTATTCGCTCCGAGTCAACTAAAGCTTCACTGG TTAACGTAGCGTTATCCAAACAAATTCAACATTCAATACCATCTCTTGGTGTGCTTATCACTCAGGCAAAATCTAAGGAA GGAGAAACACTTTATGTCCAAAAGTACGCCTACTAA
Upstream 100 bases:
>100_bases ATCTTACTCAACACGCAACAGGTAATACGGTTGAAAGCGTCAGTATGCAACGCTCTGTAGAACCTGGCGACATTGTATTT ATCGATCAGAGCTTCTTCTA
Downstream 100 bases:
>100_bases TCAAAGCATGCAGTGGTATCAGTTGCTAAAGAGCCAAGAGCGTCCCGTCCTCATCTACCAAATGGGGAAAGTGGGATCGA GTGCATTGGAAAAATCCATT
Product: exopolysaccharide biosynthesis protein
Products: ADP; protein tyrosine phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 731; Mature: 730
Protein sequence:
>731_residues MTGNSMNETHSTQAPTNQVPLIRFGHHFRTLKKNWLSILAFTIIFSLTCTWYIYSKKSVYQATATLLIQEEQKSALSIEE VYGVDTTKKEYFQTQIAILKSNHIADKVITKLNLVNHPDFTSSSGIKQKIDEIKAIPFVQDLLHVAPNPKETSQHTKPYY QALQTFKRKLDIEPVRNTQLVKIRFRSTDPQLATTIANAIGQAYIDANFEAKLVVTQNAATWLTNNSQKLEERLRASEQA LQDFLMQEGLIDINGIDDIYANELEELNRKLNAAVNNRIEAQTLIQLLKRKSTQDIDSLLSIDEFANQAQIRDLKMSEAQ AAKSVSELSQRYGPKHDRMIQAKAQLASIQARTEQLIREISFSKQQDLLAAKAQEDMLRAELDNKKSDFQMLGSQKARYE QLKREVESNKDLYEAFLNREKETNATSDYKNVTARFTDPAIVPLFPIAPQRMKLVLIATFFGFAIACALLIILETLREVI RTSSDVQDKLGVTCLGTIPKVKKRALCQKGVTYSAYLDQDEKLFSEACRSVRTSLLLRLTNSKQKILPFTSAIPEEGKTS TSINMAVSFSTMEKVLLIDCDLRKPSLAKRFNLPESSPGLTNILTMDTPLSECIIKKEEANLDVLPAGIIPPNPQELLAS DRFEKLLEYLASKYDRIIIDTPPLLSVSDALILGQKANGLITVIRSESTKASLVNVALSKQIQHSIPSLGVLITQAKSKE GETLYVQKYAY
Sequences:
>Translated_731_residues MTGNSMNETHSTQAPTNQVPLIRFGHHFRTLKKNWLSILAFTIIFSLTCTWYIYSKKSVYQATATLLIQEEQKSALSIEE VYGVDTTKKEYFQTQIAILKSNHIADKVITKLNLVNHPDFTSSSGIKQKIDEIKAIPFVQDLLHVAPNPKETSQHTKPYY QALQTFKRKLDIEPVRNTQLVKIRFRSTDPQLATTIANAIGQAYIDANFEAKLVVTQNAATWLTNNSQKLEERLRASEQA LQDFLMQEGLIDINGIDDIYANELEELNRKLNAAVNNRIEAQTLIQLLKRKSTQDIDSLLSIDEFANQAQIRDLKMSEAQ AAKSVSELSQRYGPKHDRMIQAKAQLASIQARTEQLIREISFSKQQDLLAAKAQEDMLRAELDNKKSDFQMLGSQKARYE QLKREVESNKDLYEAFLNREKETNATSDYKNVTARFTDPAIVPLFPIAPQRMKLVLIATFFGFAIACALLIILETLREVI RTSSDVQDKLGVTCLGTIPKVKKRALCQKGVTYSAYLDQDEKLFSEACRSVRTSLLLRLTNSKQKILPFTSAIPEEGKTS TSINMAVSFSTMEKVLLIDCDLRKPSLAKRFNLPESSPGLTNILTMDTPLSECIIKKEEANLDVLPAGIIPPNPQELLAS DRFEKLLEYLASKYDRIIIDTPPLLSVSDALILGQKANGLITVIRSESTKASLVNVALSKQIQHSIPSLGVLITQAKSKE GETLYVQKYAY >Mature_730_residues TGNSMNETHSTQAPTNQVPLIRFGHHFRTLKKNWLSILAFTIIFSLTCTWYIYSKKSVYQATATLLIQEEQKSALSIEEV YGVDTTKKEYFQTQIAILKSNHIADKVITKLNLVNHPDFTSSSGIKQKIDEIKAIPFVQDLLHVAPNPKETSQHTKPYYQ ALQTFKRKLDIEPVRNTQLVKIRFRSTDPQLATTIANAIGQAYIDANFEAKLVVTQNAATWLTNNSQKLEERLRASEQAL QDFLMQEGLIDINGIDDIYANELEELNRKLNAAVNNRIEAQTLIQLLKRKSTQDIDSLLSIDEFANQAQIRDLKMSEAQA AKSVSELSQRYGPKHDRMIQAKAQLASIQARTEQLIREISFSKQQDLLAAKAQEDMLRAELDNKKSDFQMLGSQKARYEQ LKREVESNKDLYEAFLNREKETNATSDYKNVTARFTDPAIVPLFPIAPQRMKLVLIATFFGFAIACALLIILETLREVIR TSSDVQDKLGVTCLGTIPKVKKRALCQKGVTYSAYLDQDEKLFSEACRSVRTSLLLRLTNSKQKILPFTSAIPEEGKTST SINMAVSFSTMEKVLLIDCDLRKPSLAKRFNLPESSPGLTNILTMDTPLSECIIKKEEANLDVLPAGIIPPNPQELLASD RFEKLLEYLASKYDRIIIDTPPLLSVSDALILGQKANGLITVIRSESTKASLVNVALSKQIQHSIPSLGVLITQAKSKEG ETLYVQKYAY
Specific function: May be involved in the production and the transport of exopolysaccharides [H]
COG id: COG3206
COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the etk/wzc family [H]
Homologues:
Organism=Escherichia coli, GI87082032, Length=636, Percent_Identity=23.8993710691824, Blast_Score=152, Evalue=6e-38, Organism=Escherichia coli, GI1787216, Length=742, Percent_Identity=24.5283018867925, Blast_Score=150, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 - InterPro: IPR003856 [H]
Pfam domain/function: PF01656 CbiA; PF02706 Wzz [H]
EC number: 2.7.1.112 [C]
Molecular weight: Translated: 82246; Mature: 82114
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGNSMNETHSTQAPTNQVPLIRFGHHFRTLKKNWLSILAFTIIFSLTCTWYIYSKKSVY CCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHH QATATLLIQEEQKSALSIEEVYGVDTTKKEYFQTQIAILKSNHIADKVITKLNLVNHPDF HHHHHHHEEHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC TSSSGIKQKIDEIKAIPFVQDLLHVAPNPKETSQHTKPYYQALQTFKRKLDIEPVRNTQL CCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEE VKIRFRSTDPQLATTIANAIGQAYIDANFEAKLVVTQNAATWLTNNSQKLEERLRASEQA EEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHEECCCHHHHHHHHHHHHHH LQDFLMQEGLIDINGIDDIYANELEELNRKLNAAVNNRIEAQTLIQLLKRKSTQDIDSLL HHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHH SIDEFANQAQIRDLKMSEAQAAKSVSELSQRYGPKHDRMIQAKAQLASIQARTEQLIREI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SFSKQQDLLAAKAQEDMLRAELDNKKSDFQMLGSQKARYEQLKREVESNKDLYEAFLNRE HCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCC KETNATSDYKNVTARFTDPAIVPLFPIAPQRMKLVLIATFFGFAIACALLIILETLREVI CCCCCCCHHHHCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTSSDVQDKLGVTCLGTIPKVKKRALCQKGVTYSAYLDQDEKLFSEACRSVRTSLLLRLT HCCCCHHHHCCCEEECCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHC NSKQKILPFTSAIPEEGKTSTSINMAVSFSTMEKVLLIDCDLRKPSLAKRFNLPESSPGL CCCCCCCCHHHCCCCCCCCCCEEEEEEEHHHHCEEEEEEECCCCCCHHHHCCCCCCCCCC TNILTMDTPLSECIIKKEEANLDVLPAGIIPPNPQELLASDRFEKLLEYLASKYDRIIID CEEEECCCCHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEC TPPLLSVSDALILGQKANGLITVIRSESTKASLVNVALSKQIQHSIPSLGVLITQAKSKE CCCCCCCCCHHEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHEEEEECCCCC GETLYVQKYAY CCEEEEEEECC >Mature Secondary Structure TGNSMNETHSTQAPTNQVPLIRFGHHFRTLKKNWLSILAFTIIFSLTCTWYIYSKKSVY CCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHH QATATLLIQEEQKSALSIEEVYGVDTTKKEYFQTQIAILKSNHIADKVITKLNLVNHPDF HHHHHHHEEHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC TSSSGIKQKIDEIKAIPFVQDLLHVAPNPKETSQHTKPYYQALQTFKRKLDIEPVRNTQL CCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEE VKIRFRSTDPQLATTIANAIGQAYIDANFEAKLVVTQNAATWLTNNSQKLEERLRASEQA EEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHEECCCHHHHHHHHHHHHHH LQDFLMQEGLIDINGIDDIYANELEELNRKLNAAVNNRIEAQTLIQLLKRKSTQDIDSLL HHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHH SIDEFANQAQIRDLKMSEAQAAKSVSELSQRYGPKHDRMIQAKAQLASIQARTEQLIREI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SFSKQQDLLAAKAQEDMLRAELDNKKSDFQMLGSQKARYEQLKREVESNKDLYEAFLNRE HCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCC KETNATSDYKNVTARFTDPAIVPLFPIAPQRMKLVLIATFFGFAIACALLIILETLREVI CCCCCCCHHHHCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTSSDVQDKLGVTCLGTIPKVKKRALCQKGVTYSAYLDQDEKLFSEACRSVRTSLLLRLT HCCCCHHHHCCCEEECCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHC NSKQKILPFTSAIPEEGKTSTSINMAVSFSTMEKVLLIDCDLRKPSLAKRFNLPESSPGL CCCCCCCCHHHCCCCCCCCCCEEEEEEEHHHHCEEEEEEECCCCCCHHHHCCCCCCCCCC TNILTMDTPLSECIIKKEEANLDVLPAGIIPPNPQELLASDRFEKLLEYLASKYDRIIID CEEEECCCCHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEC TPPLLSVSDALILGQKANGLITVIRSESTKASLVNVALSKQIQHSIPSLGVLITQAKSKE CCCCCCCCCHHEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHEEEEECCCCC GETLYVQKYAY CCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; a protein tyrosine [C]
Specific reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9434192; 8683591; 10069388 [H]