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The map label for this gene is yqfB [C]

Identifier: 156976423

GI number: 156976423

Start: 452059

End: 452379

Strand: Reverse

Name: yqfB [C]

Synonym: VIBHAR_05196

Alternate gene names: 156976423

Gene position: 452379-452059 (Counterclockwise)

Preceding gene: 156976424

Following gene: 156976422

Centisome position: 20.53

GC content: 42.68

Gene sequence:

>321_bases
ATGTCTTCACATCCAACTAAAATCACCTTCTTTGAATTCCTAACACCACTTATCACTGCAGGTAAAAAGACGATCACGAT
TCGTGATGAATCAGAAAGCCACTACGTGCCAAACACCGAAGTGGAAGTGTTCACCCTAGAAACAGACCGTAAGGTGTGTG
ACATCAAAATCCTATCAGTTGCACCACTGAAGTTTGATGACATCAACGAGTTCCACGCAGAACAAGAAGCGATTGAACTG
CCAAAACTGAAAGAGCTTATCCGCGAGATTTACCCGAACATCAATGAGCTGTATGTGATTGAGTACGAGCTGATCAAGTA
A

Upstream 100 bases:

>100_bases
AAGTTTATCGACAAACTCTGCACTCTAAATGACGTAAACGCGCCTGTTTCACACGGGCGTGATATACTCTTGCCCGATTC
GATTAATATGAGCATCGGTT

Downstream 100 bases:

>100_bases
GAACCATAAATCACTAGACGACTGGTCTAATCGCTTTTATAGTATTGCTCATGAACGCAAAAACGAACGATACACGCCAA
CACATACTCGATGTCGGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MSSHPTKITFFEFLTPLITAGKKTITIRDESESHYVPNTEVEVFTLETDRKVCDIKILSVAPLKFDDINEFHAEQEAIEL
PKLKELIREIYPNINELYVIEYELIK

Sequences:

>Translated_106_residues
MSSHPTKITFFEFLTPLITAGKKTITIRDESESHYVPNTEVEVFTLETDRKVCDIKILSVAPLKFDDINEFHAEQEAIEL
PKLKELIREIYPNINELYVIEYELIK
>Mature_105_residues
SSHPTKITFFEFLTPLITAGKKTITIRDESESHYVPNTEVEVFTLETDRKVCDIKILSVAPLKFDDINEFHAEQEAIELP
KLKELIREIYPNINELYVIEYELIK

Specific function: Unknown

COG id: COG3097

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0267 family [H]

Homologues:

Organism=Escherichia coli, GI1789267, Length=102, Percent_Identity=42.156862745098, Blast_Score=87, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007374
- InterPro:   IPR015947
- InterPro:   IPR008314 [H]

Pfam domain/function: PF04266 ASCH [H]

EC number: NA

Molecular weight: Translated: 12385; Mature: 12254

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSHPTKITFFEFLTPLITAGKKTITIRDESESHYVPNTEVEVFTLETDRKVCDIKILSV
CCCCCCEEHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEEEE
APLKFDDINEFHAEQEAIELPKLKELIREIYPNINELYVIEYELIK
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEEEEEC
>Mature Secondary Structure 
SSHPTKITFFEFLTPLITAGKKTITIRDESESHYVPNTEVEVFTLETDRKVCDIKILSV
CCCCCEEHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEEEE
APLKFDDINEFHAEQEAIELPKLKELIREIYPNINELYVIEYELIK
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]