| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is frwB [H]
Identifier: 156976414
GI number: 156976414
Start: 444006
End: 444305
Strand: Reverse
Name: frwB [H]
Synonym: VIBHAR_05187
Alternate gene names: 156976414
Gene position: 444305-444006 (Counterclockwise)
Preceding gene: 156976417
Following gene: 156976413
Centisome position: 20.16
GC content: 46.67
Gene sequence:
>300_bases ATGAAAATCGTAGCGGTGACAGCGTGCCCTACAGGCATCGCTCATACTTATATGGCGGCAGATGCGCTAATGAAAGCTGC GCCTAAGCATAACGTACAAATTAAGGTCGAAACGCAAGGTGCGATGGGTATTGAGAATCAGCTCACTCCCCACGACATTG CACAAGCGGATCGTGTCTTAATTGTGTCCGATATCGAGATTGAACAGCCAGCTCGCTTTGAAGGCACCAACAAAGTCCAA ATCCCAATTGAAGACGTGCTACTTAATGTTGATAAGGTGTTCCTTGTACACTATCGATGA
Upstream 100 bases:
>100_bases GAAATTTAAACTGTGATAGAGCTCTTGCGATTATCTGCTTTATATCCATCCTTCCGACGACCACTATGCTAAAATCCACA AAAAATAAAGTGGATAGAAC
Downstream 100 bases:
>100_bases TACTCTTTGCAGATGAACGAATACCAGATTACCTTTTTTGTCGATGATATTAACGCCAGTGCTCATGTTGCACAGCCTCT CAATCACGTCGCCAAAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: PTS system fructose-like EIIB component 2 [H]
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MKIVAVTACPTGIAHTYMAADALMKAAPKHNVQIKVETQGAMGIENQLTPHDIAQADRVLIVSDIEIEQPARFEGTNKVQ IPIEDVLLNVDKVFLVHYR
Sequences:
>Translated_99_residues MKIVAVTACPTGIAHTYMAADALMKAAPKHNVQIKVETQGAMGIENQLTPHDIAQADRVLIVSDIEIEQPARFEGTNKVQ IPIEDVLLNVDKVFLVHYR >Mature_99_residues MKIVAVTACPTGIAHTYMAADALMKAAPKHNVQIKVETQGAMGIENQLTPHDIAQADRVLIVSDIEIEQPARFEGTNKVQ IPIEDVLLNVDKVFLVHYR
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane [H]
COG id: COG1445
COG function: function code G; Phosphotransferase system fructose-specific component IIB
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1790387, Length=93, Percent_Identity=49.4623655913978, Blast_Score=100, Evalue=1e-23, Organism=Escherichia coli, GI87082348, Length=96, Percent_Identity=44.7916666666667, Blast_Score=85, Evalue=9e-19, Organism=Escherichia coli, GI1790390, Length=92, Percent_Identity=44.5652173913043, Blast_Score=82, Evalue=9e-18, Organism=Escherichia coli, GI1788492, Length=74, Percent_Identity=50, Blast_Score=79, Evalue=5e-17, Organism=Escherichia coli, GI1788730, Length=88, Percent_Identity=43.1818181818182, Blast_Score=78, Evalue=1e-16, Organism=Escherichia coli, GI1786951, Length=83, Percent_Identity=44.578313253012, Blast_Score=77, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003353 [H]
Pfam domain/function: PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 10905; Mature: 10905
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS51099 PTS_EIIB_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVAVTACPTGIAHTYMAADALMKAAPKHNVQIKVETQGAMGIENQLTPHDIAQADRVL CEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEE IVSDIEIEQPARFEGTNKVQIPIEDVLLNVDKVFLVHYR EEECCCCCCCCCCCCCCEEEEEHHHHHCCCCEEEEEEEC >Mature Secondary Structure MKIVAVTACPTGIAHTYMAADALMKAAPKHNVQIKVETQGAMGIENQLTPHDIAQADRVL CEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEE IVSDIEIEQPARFEGTNKVQIPIEDVLLNVDKVFLVHYR EEECCCCCCCCCCCCCCEEEEEHHHHHCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]