Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976189

Identifier: 156976189

GI number: 156976189

Start: 216839

End: 217042

Strand: Reverse

Name: 156976189

Synonym: VIBHAR_04960

Alternate gene names: NA

Gene position: 217042-216839 (Counterclockwise)

Preceding gene: 156976190

Following gene: 156976187

Centisome position: 9.85

GC content: 43.14

Gene sequence:

>204_bases
TTGTCTGCAAAAAAGCGTTTGGAAAAGAGATCTAGCGACGGATATAGATATACCCAAGTGACTTCAAGATGCAGGATTCA
GAGCGTTGTCATTGATTCGAGGTCAAGGAAAACGACGCCGCGTAATAGCCTGTCTCTTGATCACAAGTCTAGTGATCAAG
AGACATTGCGAGTTCGTAGCCCTCAAGGATGGTTTGTAATTTAA

Upstream 100 bases:

>100_bases
TCGCTACTGCGTTAATAGAACCTTTCTATTCGCTAACAACGCGCAAAATTTAGTTCGTCCGAACGCTCAAAGCCTCCCCT
TCATCCGGGAGGCTTTTTCT

Downstream 100 bases:

>100_bases
ACCATCCTTCCCAAAGCACCTTTATTGAAGCTCTACCCGTCCTTTTGGTATCTTTCCAACCATAGTAGCTTCCAAGCTTT
TTGGCCCAATACCTTTTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MSAKKRLEKRSSDGYRYTQVTSRCRIQSVVIDSRSRKTTPRNSLSLDHKSSDQETLRVRSPQGWFVI

Sequences:

>Translated_67_residues
MSAKKRLEKRSSDGYRYTQVTSRCRIQSVVIDSRSRKTTPRNSLSLDHKSSDQETLRVRSPQGWFVI
>Mature_66_residues
SAKKRLEKRSSDGYRYTQVTSRCRIQSVVIDSRSRKTTPRNSLSLDHKSSDQETLRVRSPQGWFVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7815; Mature: 7684

Theoretical pI: Translated: 11.50; Mature: 11.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAKKRLEKRSSDGYRYTQVTSRCRIQSVVIDSRSRKTTPRNSLSLDHKSSDQETLRVRS
CCHHHHHHHCCCCCEEEEHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEC
PQGWFVI
CCCCEEC
>Mature Secondary Structure 
SAKKRLEKRSSDGYRYTQVTSRCRIQSVVIDSRSRKTTPRNSLSLDHKSSDQETLRVRS
CHHHHHHHCCCCCEEEEHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEC
PQGWFVI
CCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA