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The map label for this gene is pinE [C]

Identifier: 156976041

GI number: 156976041

Start: 72594

End: 73223

Strand: Reverse

Name: pinE [C]

Synonym: VIBHAR_04811

Alternate gene names: 156976041

Gene position: 73223-72594 (Counterclockwise)

Preceding gene: 156976042

Following gene: 156976040

Centisome position: 3.32

GC content: 48.1

Gene sequence:

>630_bases
ATGAACACCTTTCTCTATACGCGTCACTCACCAAAGAATCGAGCTTACCCCGAACAGCTTAAAACTCTGCGAACTTTTGC
CCCTGGAGCCGTTCACTTTGAAGACAAAGTACGTGGCTGCACACCACCAGCAGAACGACACGCTTTTCAGCAACTCATCA
ACACCGTACAATCCGGTGACACTTTGGTGCTTTGGTGGTTAACCGCCTTTGGCCGAGACTTCAGCCAAGCATTAAGCACG
ATTCAAACTCTGCTTAACAAAGGTGTCTCCCTAAAAACCGTTTGTGAACCACTGACTTTTGAACCCGATTCAGTACAAAC
GCAAACCTTACTTTCGCTGCTTTCTGGATACGGACAAGTGCAAAAGGAACATCGCTTGTTCGCCGCAGAACAAGGCCGCA
AAGCACTAAAAGACGACCCACAGATGTGGAAGCAGAAATTCCGTGGTCGCCCTGCAGACAAAGCGAAACATCAGTACATT
ACGACCTTGCTTCTGGAAGGCAATACGCTACAAAGCGTCGCAGGACAATGTGAAGTCAGCCTATCGACGGTCAAACGTGT
GAAAGCCAAACTGAATGATTTTGACGAAGAAGGCAGCTTACGTCGCCGTGGTGATGGTGAAAAATCATGA

Upstream 100 bases:

>100_bases
CGAACCAATGGCTCAATTGGTGTTGTGAAGATAAATGAACCAGCGTATGTTTATGGGCCATTACAGTATATGAGCCATTC
AGACGAGGCAATTCGCGATC

Downstream 100 bases:

>100_bases
GTCGACCGATTGAATTTAAAACCATCTTGCTGGCGTGTCTTATCATCAGTGTTGGTCAACTCAGCATGGGCTTGGTGTTT
CCATCTCTTCCTTGGATCGC

Product: DNA invertase

Products: NA

Alternate protein names: Recombinase; DNA Invertase; Resolvase Domain-Containing Protein

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MNTFLYTRHSPKNRAYPEQLKTLRTFAPGAVHFEDKVRGCTPPAERHAFQQLINTVQSGDTLVLWWLTAFGRDFSQALST
IQTLLNKGVSLKTVCEPLTFEPDSVQTQTLLSLLSGYGQVQKEHRLFAAEQGRKALKDDPQMWKQKFRGRPADKAKHQYI
TTLLLEGNTLQSVAGQCEVSLSTVKRVKAKLNDFDEEGSLRRRGDGEKS

Sequences:

>Translated_209_residues
MNTFLYTRHSPKNRAYPEQLKTLRTFAPGAVHFEDKVRGCTPPAERHAFQQLINTVQSGDTLVLWWLTAFGRDFSQALST
IQTLLNKGVSLKTVCEPLTFEPDSVQTQTLLSLLSGYGQVQKEHRLFAAEQGRKALKDDPQMWKQKFRGRPADKAKHQYI
TTLLLEGNTLQSVAGQCEVSLSTVKRVKAKLNDFDEEGSLRRRGDGEKS
>Mature_209_residues
MNTFLYTRHSPKNRAYPEQLKTLRTFAPGAVHFEDKVRGCTPPAERHAFQQLINTVQSGDTLVLWWLTAFGRDFSQALST
IQTLLNKGVSLKTVCEPLTFEPDSVQTQTLLSLLSGYGQVQKEHRLFAAEQGRKALKDDPQMWKQKFRGRPADKAKHQYI
TTLLLEGNTLQSVAGQCEVSLSTVKRVKAKLNDFDEEGSLRRRGDGEKS

Specific function: This Protein Catalyzes The Inversion Of An 1800-Bp E.Coli DNA Fragment, The P Region, Which Can Exist In Either Orientation. The Function Of The Inversion Is Not Yet Clear. [C]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23609; Mature: 23609

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTFLYTRHSPKNRAYPEQLKTLRTFAPGAVHFEDKVRGCTPPAERHAFQQLINTVQSGD
CCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHCCC
TLVLWWLTAFGRDFSQALSTIQTLLNKGVSLKTVCEPLTFEPDSVQTQTLLSLLSGYGQV
EEEEHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
QKEHRLFAAEQGRKALKDDPQMWKQKFRGRPADKAKHQYITTLLLEGNTLQSVAGQCEVS
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
LSTVKRVKAKLNDFDEEGSLRRRGDGEKS
HHHHHHHHHHHHCCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MNTFLYTRHSPKNRAYPEQLKTLRTFAPGAVHFEDKVRGCTPPAERHAFQQLINTVQSGD
CCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHCCC
TLVLWWLTAFGRDFSQALSTIQTLLNKGVSLKTVCEPLTFEPDSVQTQTLLSLLSGYGQV
EEEEHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
QKEHRLFAAEQGRKALKDDPQMWKQKFRGRPADKAKHQYITTLLLEGNTLQSVAGQCEVS
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
LSTVKRVKAKLNDFDEEGSLRRRGDGEKS
HHHHHHHHHHHHCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA