Click here to switch to the map view.

The map label for this gene is yceJ [C]

Identifier: 156975968

GI number: 156975968

Start: 10173

End: 10760

Strand: Reverse

Name: yceJ [C]

Synonym: VIBHAR_04738

Alternate gene names: 156975968

Gene position: 10760-10173 (Counterclockwise)

Preceding gene: 156975969

Following gene: 156975963

Centisome position: 0.49

GC content: 35.37

Gene sequence:

>588_bases
ATGCCTCTCATCTTTTTTTGTCCTTTAATTTATGGTGGTATAATGATGTCAAATGTGGATAATTTGGGTAAATCCGAACG
CTATGATGGGTTTAGTAAAATATTACATTGGGTTATGGCTGTGCTTATTATATACGCAACCATTGCGGGCTATGGAATGC
TATTAGTTCAGGATGACCCAGAACTGTTTCATATTTTGTCTACACTTAATATGTCAGGAGCAACGATTGCTACTGTGCTA
TTTGTTTTTCGATGGAGCTGGTCGTTTTTCCGAGAAACTCCTAAGCTTCCAAGTTCGATCTCTAGCTTTCAACAGAATGT
TGCAAAGCTGATACATAGTTTTGCTTATCTACTTATGTTTATTGTATTTGTGAGTGGGTACTTAATGCTCAAGCACGACT
ATGAATTCTTTTGGTTGTTCACTATTTCGCAACCGATATCTAATAACGAAGTTAATGACTTTTTCTTTATTGTTCATAGA
ATTAGCTGTGTGATGTTGGGTTGTTTTATTGGGTTGCATGTCGCAGCTGCTTTAAAGCACCATATTATTCTTAAAAATGA
TGTTTTGAAAAGCATGACTTTTTCATAA

Upstream 100 bases:

>100_bases
ACAACCGATAAAACTTAGGTTCAACGAGTTGGTAAAGTGGTATTGCTAACTCGTTGAGCCTTTAGAGGGGGGCCTATAAC
GGTGCTTGTGTGCTGATTGT

Downstream 100 bases:

>100_bases
GCTGAAAAAGAGTCCGTCAGGGACTTTGTGGCGGAGTTCGGGTAGAAAACTAATAGCCTCAAACCTTATTTAGCGCTTTG
ATCATTGCGTAAATCTCACC

Product: cytochrome b561

Products: NA

Alternate protein names: Cytochrome; Cytochrome B/B6 Domain

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MPLIFFCPLIYGGIMMSNVDNLGKSERYDGFSKILHWVMAVLIIYATIAGYGMLLVQDDPELFHILSTLNMSGATIATVL
FVFRWSWSFFRETPKLPSSISSFQQNVAKLIHSFAYLLMFIVFVSGYLMLKHDYEFFWLFTISQPISNNEVNDFFFIVHR
ISCVMLGCFIGLHVAAALKHHIILKNDVLKSMTFS

Sequences:

>Translated_195_residues
MPLIFFCPLIYGGIMMSNVDNLGKSERYDGFSKILHWVMAVLIIYATIAGYGMLLVQDDPELFHILSTLNMSGATIATVL
FVFRWSWSFFRETPKLPSSISSFQQNVAKLIHSFAYLLMFIVFVSGYLMLKHDYEFFWLFTISQPISNNEVNDFFFIVHR
ISCVMLGCFIGLHVAAALKHHIILKNDVLKSMTFS
>Mature_194_residues
PLIFFCPLIYGGIMMSNVDNLGKSERYDGFSKILHWVMAVLIIYATIAGYGMLLVQDDPELFHILSTLNMSGATIATVLF
VFRWSWSFFRETPKLPSSISSFQQNVAKLIHSFAYLLMFIVFVSGYLMLKHDYEFFWLFTISQPISNNEVNDFFFIVHRI
SCVMLGCFIGLHVAAALKHHIILKNDVLKSMTFS

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22374; Mature: 22243

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLIFFCPLIYGGIMMSNVDNLGKSERYDGFSKILHWVMAVLIIYATIAGYGMLLVQDDP
CCCEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCH
ELFHILSTLNMSGATIATVLFVFRWSWSFFRETPKLPSSISSFQQNVAKLIHSFAYLLMF
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IVFVSGYLMLKHDYEFFWLFTISQPISNNEVNDFFFIVHRISCVMLGCFIGLHVAAALKH
HHHHHCHHEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HIILKNDVLKSMTFS
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
PLIFFCPLIYGGIMMSNVDNLGKSERYDGFSKILHWVMAVLIIYATIAGYGMLLVQDDP
CCEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCH
ELFHILSTLNMSGATIATVLFVFRWSWSFFRETPKLPSSISSFQQNVAKLIHSFAYLLMF
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IVFVSGYLMLKHDYEFFWLFTISQPISNNEVNDFFFIVHRISCVMLGCFIGLHVAAALKH
HHHHHCHHEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HIILKNDVLKSMTFS
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA