Click here to switch to the map view.

The map label for this gene is yccW [C]

Identifier: 156938052

GI number: 156938052

Start: 1126947

End: 1128062

Strand: Reverse

Name: yccW [C]

Synonym: Igni_1265

Alternate gene names: 156938052

Gene position: 1128062-1126947 (Counterclockwise)

Preceding gene: 156938056

Following gene: 156938050

Centisome position: 86.94

GC content: 58.24

Gene sequence:

>1116_bases
ATGCGGATTAGAGTGGTGGGGGAAGGTCCGAAACTTTTGGAAAGAGGGGAAATGATAATCTATAGGAGGTGGCTCAAGGG
CTCGCCGGCGCCCGTCGGGGCCTTGGTCACCTTGAGCGACGGCGAGGAGGACTTGGCGTGCGGCCTCTTAGACAAGATAG
GAGTTAGGGTGATCTCCTTCGAGCCTTGCCCGGACAGCGCGGAGGAGGCTTTTAGAGAAGTTATAGAGAAGGCCTTCGAG
GCCAAGTCCCTCCTCCGCTACGAGGCTTACCGCTTGATTAACGGGGACGGCGACTCCTTCCCCGGCCTAATAGTTGACGT
CTACAAGGATTTGGCCGTCCTCCAGTCCTCCTCCCTAGCTATAGACAAGCACATAATGACCATAGCGAAGATAGTGAAGG
ACGTGACCGGGGCGGAGGCGGTGGCCGAGAAGAGCTCCCAGAGGGTCAGGGCCAAGGTGGGCTTGCCCCCTAGGGAGGGC
CTCTTGATAGGCAATAAGAAGGAGACCGTGGTGGACGAGGAGGGGGTGAAGTTCAAGGTGAGCATAGAGGGGCAGAAGAC
CGGGCTCTACTTGGACCAGAGGGAGAACCGGGTTTACGCGGAGAGGTTCTCTTCCGGCTCTAAGTTCTTGGACGCCTTCT
CCTACACCGGCGGCTTCGGCCTCCACGCCTTGAAGGCCGGCGCGAGGGAAGTAACCTTCGTGGACGAGGACCCTTGGGCT
TTGAGGGTTCTGAGGGAGAACTTGAGGCTGAACAACTTCGACGAGGGGAAGGTGAGGGTAGTTAGGGAGGACGCTTGGAA
GTTCTTCGCGAGGAGTATTAAGAGGGGAAAGTCTTTCGAAGTGGGCAGCGTAGACCCACCGGCCTTAATGGACGACTACA
AGGACGGTTACGTTAGGTACGTGAGGGCTTACTCCGGCGCGGGGTCGATAATAGAGGTCCTAGCCGTGCTCTCCTCTTGC
TCGCGGAGCATGGATAGGGAGACTTTCGTGAGGGCCGTCCACCAAGCCTTGGCCCCCAAGTACAGAATACTAGAGTTGAG
GGGCTCCGCCCCGGACCACAGCACCCGGATGGGCTTGGAGGACTATTTGAAGACCGCCTTCGTCTACTTGGGCTGA

Upstream 100 bases:

>100_bases
CACACTAGAGATGACCGGCTAATAAAGCTTGTTAAACTGGTAATACCGAACGGTTCCGTTTTTGAAATCCTAACCGCCGG
CCTCTCACTAGGTCTGAAGG

Downstream 100 bases:

>100_bases
GTCGGGGCGTGGGTTCTAGCTCACCCTTCGCCTCTTAACACCGTCCTCATCCCCAGCTTGGCCTCCACCAAACTGATTAA
GAAATTTGACCCCAAGCCCC

Product: SAM-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MRIRVVGEGPKLLERGEMIIYRRWLKGSPAPVGALVTLSDGEEDLACGLLDKIGVRVISFEPCPDSAEEAFREVIEKAFE
AKSLLRYEAYRLINGDGDSFPGLIVDVYKDLAVLQSSSLAIDKHIMTIAKIVKDVTGAEAVAEKSSQRVRAKVGLPPREG
LLIGNKKETVVDEEGVKFKVSIEGQKTGLYLDQRENRVYAERFSSGSKFLDAFSYTGGFGLHALKAGAREVTFVDEDPWA
LRVLRENLRLNNFDEGKVRVVREDAWKFFARSIKRGKSFEVGSVDPPALMDDYKDGYVRYVRAYSGAGSIIEVLAVLSSC
SRSMDRETFVRAVHQALAPKYRILELRGSAPDHSTRMGLEDYLKTAFVYLG

Sequences:

>Translated_371_residues
MRIRVVGEGPKLLERGEMIIYRRWLKGSPAPVGALVTLSDGEEDLACGLLDKIGVRVISFEPCPDSAEEAFREVIEKAFE
AKSLLRYEAYRLINGDGDSFPGLIVDVYKDLAVLQSSSLAIDKHIMTIAKIVKDVTGAEAVAEKSSQRVRAKVGLPPREG
LLIGNKKETVVDEEGVKFKVSIEGQKTGLYLDQRENRVYAERFSSGSKFLDAFSYTGGFGLHALKAGAREVTFVDEDPWA
LRVLRENLRLNNFDEGKVRVVREDAWKFFARSIKRGKSFEVGSVDPPALMDDYKDGYVRYVRAYSGAGSIIEVLAVLSSC
SRSMDRETFVRAVHQALAPKYRILELRGSAPDHSTRMGLEDYLKTAFVYLG
>Mature_371_residues
MRIRVVGEGPKLLERGEMIIYRRWLKGSPAPVGALVTLSDGEEDLACGLLDKIGVRVISFEPCPDSAEEAFREVIEKAFE
AKSLLRYEAYRLINGDGDSFPGLIVDVYKDLAVLQSSSLAIDKHIMTIAKIVKDVTGAEAVAEKSSQRVRAKVGLPPREG
LLIGNKKETVVDEEGVKFKVSIEGQKTGLYLDQRENRVYAERFSSGSKFLDAFSYTGGFGLHALKAGAREVTFVDEDPWA
LRVLRENLRLNNFDEGKVRVVREDAWKFFARSIKRGKSFEVGSVDPPALMDDYKDGYVRYVRAYSGAGSIIEVLAVLSSC
SRSMDRETFVRAVHQALAPKYRILELRGSAPDHSTRMGLEDYLKTAFVYLG

Specific function: Unknown

COG id: COG1092

COG function: function code R; Predicted SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

Organism=Escherichia coli, GI145693111, Length=302, Percent_Identity=28.8079470198675, Blast_Score=130, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR019614 [H]

Pfam domain/function: PF10672 Methyltrans_SAM [H]

EC number: NA

Molecular weight: Translated: 41303; Mature: 41303

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRVVGEGPKLLERGEMIIYRRWLKGSPAPVGALVTLSDGEEDLACGLLDKIGVRVISF
CEEEEECCCHHHHHCCCEEEEEHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCEEEEEE
EPCPDSAEEAFREVIEKAFEAKSLLRYEAYRLINGDGDSFPGLIVDVYKDLAVLQSSSLA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHCCCHH
IDKHIMTIAKIVKDVTGAEAVAEKSSQRVRAKVGLPPREGLLIGNKKETVVDEEGVKFKV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCCCCEEECCCCCCEECCCCCEEEE
SIEGQKTGLYLDQRENRVYAERFSSGSKFLDAFSYTGGFGLHALKAGAREVTFVDEDPWA
EECCCCCCEEEECCCCHHHHHHHCCCHHHHHHHHCCCCCCHHHHHCCCCEEEEECCCCHH
LRVLRENLRLNNFDEGKVRVVREDAWKFFARSIKRGKSFEVGSVDPPALMDDYKDGYVRY
HHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHHHH
VRAYSGAGSIIEVLAVLSSCSRSMDRETFVRAVHQALAPKYRILELRGSAPDHSTRMGLE
HHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHCCHH
DYLKTAFVYLG
HHHHHHHHCCC
>Mature Secondary Structure
MRIRVVGEGPKLLERGEMIIYRRWLKGSPAPVGALVTLSDGEEDLACGLLDKIGVRVISF
CEEEEECCCHHHHHCCCEEEEEHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCEEEEEE
EPCPDSAEEAFREVIEKAFEAKSLLRYEAYRLINGDGDSFPGLIVDVYKDLAVLQSSSLA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHCCCHH
IDKHIMTIAKIVKDVTGAEAVAEKSSQRVRAKVGLPPREGLLIGNKKETVVDEEGVKFKV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCCCCEEECCCCCCEECCCCCEEEE
SIEGQKTGLYLDQRENRVYAERFSSGSKFLDAFSYTGGFGLHALKAGAREVTFVDEDPWA
EECCCCCCEEEECCCCHHHHHHHCCCHHHHHHHHCCCCCCHHHHHCCCCEEEEECCCCHH
LRVLRENLRLNNFDEGKVRVVREDAWKFFARSIKRGKSFEVGSVDPPALMDDYKDGYVRY
HHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHHHH
VRAYSGAGSIIEVLAVLSSCSRSMDRETFVRAVHQALAPKYRILELRGSAPDHSTRMGLE
HHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHCCHH
DYLKTAFVYLG
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]