| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937999
Identifier: 156937999
GI number: 156937999
Start: 1080780
End: 1081763
Strand: Direct
Name: 156937999
Synonym: Igni_1212
Alternate gene names: NA
Gene position: 1080780-1081763 (Clockwise)
Preceding gene: 156937995
Following gene: 156938000
Centisome position: 83.29
GC content: 56.3
Gene sequence:
>984_bases ATGACGTCGCTTACGGCTAAGGACATTATGAGGAAAGTTTTCCCGGTTGCCGACCCGGAGGAGCCGGTCTTAGAGGCCGC GAAGAAGATGGTAGAGCACGAGTACGGCGCGGTGTTGATACTCTCAGACGACGGCACCTTGAGCGGGATAATGACCGAGA GGGACGTGCTTAGGGCGGTTGCAGAGGGGAAGGACATAGCGCAAATACCGGTCAAGGACTTGATGAAGAAAACCACCGTC GTGGTACACAAGGACGTTCCAGTAAGGCTCGTCTTGCAGCTGTTCGGCGCGTACAAAGTTAGGAGGATGCCGGTGACGGA CGACGACGGGAGGGTCATAGGAGTTATAAGCTCCACGGACGTGGTTTACGAGGCCATACCCAAGGTCCTCCACCCCCTCG CGGGCAGGATAGGGGACGCCATGAAGCCCGCGGAGGAAGTGGAGGACAGCGTGCCCAGCGCCGCTAGGTACTTCGCCTCG AAGAAGGTGGACGGCGCGCTGGCCGGGGGCAAGCTCATATCCGAGAGGAGCGTCATAAGGGCCTTGCTGGACTCCACCAA GCCCAGCGAGAGGGCCGAGCGGGTCATCTACGTCCCGCCGGAGATGAACTTGAGGAACGCCTCTATACTCATGAAGCTGA ACAAGATAAGGTTCGTGATGAACGACAACAACTACGCGTTTACGAGGGACATAGCAATAGCCGCGACGGAGAGGGCCGAG TTCACTATGAAGAGTTACATACTGATAAAGACTAAGCCGGGCTTCGAAAAGGAAATCGCAGAGAAGGCCTCCTCTTTGAA GAGCAACATAGTTAGCATAGAGTACGTCGCGGGCCCCTACGACTTGGTGTTGACGGCGCTAACCGGCCCCCAAGAGGAGG TGAAGGACTTGCTCATCCCCCTCTTAAGGGACAAGGAGCAAGTGGTTGACACTTTAACCCTTGTTGTCCTAGGGGAAAAG TACTTAGGAGGGAGCGGAGAATAA
Upstream 100 bases:
>100_bases CGCGGTCCCTACCAAGTAAACGAAGTACATGACGTCGCGTCCGCGCTCGCTCCTACACAAACCTTTAATCTATTGGTTGC CTACCCGTCCTTAGAGAGTC
Downstream 100 bases:
>100_bases AGGACATTGAGGAAAGGGTGCTAAAGGATGGCTGAGGTCCTCGCTTTCGACAGCTCAGAGAAGCTTAAGGAGTACATCGA AAAGTTGAAGGATGAGCTCG
Product: signal transduction protein
Products: NA
Alternate protein names: OrfX [H]
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MTSLTAKDIMRKVFPVADPEEPVLEAAKKMVEHEYGAVLILSDDGTLSGIMTERDVLRAVAEGKDIAQIPVKDLMKKTTV VVHKDVPVRLVLQLFGAYKVRRMPVTDDDGRVIGVISSTDVVYEAIPKVLHPLAGRIGDAMKPAEEVEDSVPSAARYFAS KKVDGALAGGKLISERSVIRALLDSTKPSERAERVIYVPPEMNLRNASILMKLNKIRFVMNDNNYAFTRDIAIAATERAE FTMKSYILIKTKPGFEKEIAEKASSLKSNIVSIEYVAGPYDLVLTALTGPQEEVKDLLIPLLRDKEQVVDTLTLVVLGEK YLGGSGE
Sequences:
>Translated_327_residues MTSLTAKDIMRKVFPVADPEEPVLEAAKKMVEHEYGAVLILSDDGTLSGIMTERDVLRAVAEGKDIAQIPVKDLMKKTTV VVHKDVPVRLVLQLFGAYKVRRMPVTDDDGRVIGVISSTDVVYEAIPKVLHPLAGRIGDAMKPAEEVEDSVPSAARYFAS KKVDGALAGGKLISERSVIRALLDSTKPSERAERVIYVPPEMNLRNASILMKLNKIRFVMNDNNYAFTRDIAIAATERAE FTMKSYILIKTKPGFEKEIAEKASSLKSNIVSIEYVAGPYDLVLTALTGPQEEVKDLLIPLLRDKEQVVDTLTLVVLGEK YLGGSGE >Mature_326_residues TSLTAKDIMRKVFPVADPEEPVLEAAKKMVEHEYGAVLILSDDGTLSGIMTERDVLRAVAEGKDIAQIPVKDLMKKTTVV VHKDVPVRLVLQLFGAYKVRRMPVTDDDGRVIGVISSTDVVYEAIPKVLHPLAGRIGDAMKPAEEVEDSVPSAARYFASK KVDGALAGGKLISERSVIRALLDSTKPSERAERVIYVPPEMNLRNASILMKLNKIRFVMNDNNYAFTRDIAIAATERAEF TMKSYILIKTKPGFEKEIAEKASSLKSNIVSIEYVAGPYDLVLTALTGPQEEVKDLLIPLLRDKEQVVDTLTLVVLGEKY LGGSGE
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 [H]
Pfam domain/function: PF00571 CBS [H]
EC number: NA
Molecular weight: Translated: 35927; Mature: 35796
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLTAKDIMRKVFPVADPEEPVLEAAKKMVEHEYGAVLILSDDGTLSGIMTERDVLRAV CCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCEEHHHHHHHHHHHH AEGKDIAQIPVKDLMKKTTVVVHKDVPVRLVLQLFGAYKVRRMPVTDDDGRVIGVISSTD HCCCCEEECCHHHHHHHHEEEEECCCCHHHHHHHHCCHHEEECCCCCCCCCEEEEECCCH VVYEAIPKVLHPLAGRIGDAMKPAEEVEDSVPSAARYFASKKVDGALAGGKLISERSVIR HHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCCCHHCCCHHHHHHHHHH ALLDSTKPSERAERVIYVPPEMNLRNASILMKLNKIRFVMNDNNYAFTRDIAIAATERAE HHHHCCCCHHHCCEEEECCCCCCCCCHHHEEEEEEEEEEEECCCEEEEEEEEEEECCHHH FTMKSYILIKTKPGFEKEIAEKASSLKSNIVSIEYVAGPYDLVLTALTGPQEEVKDLLIP EEEEEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEECCCHHHEEEECCCCHHHHHHHHHH LLRDKEQVVDTLTLVVLGEKYLGGSGE HHCCHHHHHHHHHHHHCCHHHCCCCCC >Mature Secondary Structure TSLTAKDIMRKVFPVADPEEPVLEAAKKMVEHEYGAVLILSDDGTLSGIMTERDVLRAV CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCEEHHHHHHHHHHHH AEGKDIAQIPVKDLMKKTTVVVHKDVPVRLVLQLFGAYKVRRMPVTDDDGRVIGVISSTD HCCCCEEECCHHHHHHHHEEEEECCCCHHHHHHHHCCHHEEECCCCCCCCCEEEEECCCH VVYEAIPKVLHPLAGRIGDAMKPAEEVEDSVPSAARYFASKKVDGALAGGKLISERSVIR HHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCCCHHCCCHHHHHHHHHH ALLDSTKPSERAERVIYVPPEMNLRNASILMKLNKIRFVMNDNNYAFTRDIAIAATERAE HHHHCCCCHHHCCEEEECCCCCCCCCHHHEEEEEEEEEEEECCCEEEEEEEEEEECCHHH FTMKSYILIKTKPGFEKEIAEKASSLKSNIVSIEYVAGPYDLVLTALTGPQEEVKDLLIP EEEEEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEECCCHHHEEEECCCCHHHHHHHHHH LLRDKEQVVDTLTLVVLGEKYLGGSGE HHCCHHHHHHHHHHHHCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014; 8522533 [H]