| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937993
Identifier: 156937993
GI number: 156937993
Start: 1076152
End: 1076490
Strand: Direct
Name: 156937993
Synonym: Igni_1206
Alternate gene names: NA
Gene position: 1076152-1076490 (Clockwise)
Preceding gene: 156937980
Following gene: 156937995
Centisome position: 82.94
GC content: 52.8
Gene sequence:
>339_bases ATGTCGGACCCCGTGAAGAGAGCGGCCCAGCTCTTGAAGGAAGGCGCCACGATGTTGCCGGAGACTTGTCCTATATGCGG CTCCCCCCTCTACAAGCTCAAAGACGGCACGATAGTTTGTCCCATCCACGGCGAAATACGTAGGATCAAGAGCGCGGTCG AACAGAAGGGTAAGAAGGAGTTAAACGTCAACGAAGTATTGAAGGAGGTCACAGAAGTAGCTTTAGAGAAGCTCAGCAAG CTCTCCTCGAAGGCGTATACGGGAGGGAAGGAGGAAGCTGAAGAAATGTTGCTATGGCTGAAGGTCCTTGAAAAGGCCGT AAAGCTCAAGGGCGAGTGA
Upstream 100 bases:
>100_bases TCTTCCGTCCGAACAGCGGCATCACTGCCCTCCGAGCGGTGTCTCCATCGAATGGCTTTAACTTAATGCTTTCTGCACGG GGCTGTCAGGGGGTTAAGGG
Downstream 100 bases:
>100_bases GGGCCTCGATCGCTCGGGCCGTGCTAACCACCTCCGCCCCGTACACGGCCTTCATGTACTCCAACCACCTCTGTTGCTCC TCCGGGGGGACGGACATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MSDPVKRAAQLLKEGATMLPETCPICGSPLYKLKDGTIVCPIHGEIRRIKSAVEQKGKKELNVNEVLKEVTEVALEKLSK LSSKAYTGGKEEAEEMLLWLKVLEKAVKLKGE
Sequences:
>Translated_112_residues MSDPVKRAAQLLKEGATMLPETCPICGSPLYKLKDGTIVCPIHGEIRRIKSAVEQKGKKELNVNEVLKEVTEVALEKLSK LSSKAYTGGKEEAEEMLLWLKVLEKAVKLKGE >Mature_111_residues SDPVKRAAQLLKEGATMLPETCPICGSPLYKLKDGTIVCPIHGEIRRIKSAVEQKGKKELNVNEVLKEVTEVALEKLSKL SSKAYTGGKEEAEEMLLWLKVLEKAVKLKGE
Specific function: Unknown
COG id: COG1645
COG function: function code R; Uncharacterized Zn-finger containing protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0148 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009563 - InterPro: IPR022954 [H]
Pfam domain/function: PF06677 Auto_anti-p27 [H]
EC number: NA
Molecular weight: Translated: 12364; Mature: 12233
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPVKRAAQLLKEGATMLPETCPICGSPLYKLKDGTIVCPIHGEIRRIKSAVEQKGKKE CCCHHHHHHHHHHCCHHHCCCCCCCCCCCCEEECCCCEEECCHHHHHHHHHHHHHHCCCC LNVNEVLKEVTEVALEKLSKLSSKAYTGGKEEAEEMLLWLKVLEKAVKLKGE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDPVKRAAQLLKEGATMLPETCPICGSPLYKLKDGTIVCPIHGEIRRIKSAVEQKGKKE CCHHHHHHHHHHCCHHHCCCCCCCCCCCCEEECCCCEEECCHHHHHHHHHHHHHHCCCC LNVNEVLKEVTEVALEKLSKLSSKAYTGGKEEAEEMLLWLKVLEKAVKLKGE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA