| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937810
Identifier: 156937810
GI number: 156937810
Start: 909593
End: 910372
Strand: Reverse
Name: 156937810
Synonym: Igni_1020
Alternate gene names: NA
Gene position: 910372-909593 (Counterclockwise)
Preceding gene: 156937811
Following gene: 156937809
Centisome position: 70.16
GC content: 59.87
Gene sequence:
>780_bases TTGATAGGCAAGGTAATAACGCTAATCATTAGTGTTTTGATAGCGGCGCTCGTGTCCGGTAACCTAGGCAACCCCGGGGC CGGCCTCGGGAGCTCGGAAGAGCTCGAAGTCCCCGAGGCCCTCGCCTCCAGAAGCTTGACCTACGGCCTCGACCCGTGGG ATGTCGCCTCAGTAGCGTTGAGGAACACCGTAACTGTCGTAGTTATTGCGGTGGGAGCGTCGGTCCTCTTGGGTTCGTTG TGCTACTTGCGCTTCGGCAAGAGGGCCTCGTTCGAAGCCTTGGCGTACGTCCCGGAGTACGTGTACGCCTTGCTCCTTTA CCTCCTCTCTTGGCGCTTCCCTTGGCCCTCCCCCTTGCCCGGGGCCGACCCCTCCAAGGCCGCAGAATACGCACTGGTGA TAATAATGTCCGAGTGTCCTAAGGTAGCGTACGTGGTGTCGGAGGGGGTCGAAGGGAGGGAGGAGCTCAAGGGAGTAAGG CTCTTCTGGAAGGCTGTGGGGCTGGACGAGAGGGGAGTGAGGTCCAAGCTCTTGTTAGCCTCCAAGTGGCTGCTCTTGGC GCAGTTCTTCAACTTGACCTCCTTAGTCTTAGAAAGGTCCGTGTTGGTGGAGCCGTTGGTAGGCTACTGGGGGGTGGGGG AAGCCTTGTGCAAGGCCGTGACGGAGGCCGACCCCCAACTCGCTTTCTCTTCGTTCGTAGCAGTGGCGGTTTCGGTAATT GCACTGAACGCGCTGGGTGAGGCCCTTGTGCGGAGAAGGCTTGCCCTTGGAGCCGCCTAG
Upstream 100 bases:
>100_bases TTGCTCGACTCGTCGCGGGCCGGGTGGTTCTTCACCGAGGGAGGGATAGACGGCGGCGTGCCGCTGCCCTTCAACAAGCT CGCCCTGTTGAGGTGAGCCG
Downstream 100 bases:
>100_bases CCCCTCCCACCCGTTAGGAACCACCCCCTTGGGGGAGGACGCGCTGTGCGCCCTGGCCGCGGGGCTCTGGACGAGCTTGG AGGTGGCCGCGGTCTCCTAC
Product: binding-protein-dependent transporters inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MIGKVITLIISVLIAALVSGNLGNPGAGLGSSEELEVPEALASRSLTYGLDPWDVASVALRNTVTVVVIAVGASVLLGSL CYLRFGKRASFEALAYVPEYVYALLLYLLSWRFPWPSPLPGADPSKAAEYALVIIMSECPKVAYVVSEGVEGREELKGVR LFWKAVGLDERGVRSKLLLASKWLLLAQFFNLTSLVLERSVLVEPLVGYWGVGEALCKAVTEADPQLAFSSFVAVAVSVI ALNALGEALVRRRLALGAA
Sequences:
>Translated_259_residues MIGKVITLIISVLIAALVSGNLGNPGAGLGSSEELEVPEALASRSLTYGLDPWDVASVALRNTVTVVVIAVGASVLLGSL CYLRFGKRASFEALAYVPEYVYALLLYLLSWRFPWPSPLPGADPSKAAEYALVIIMSECPKVAYVVSEGVEGREELKGVR LFWKAVGLDERGVRSKLLLASKWLLLAQFFNLTSLVLERSVLVEPLVGYWGVGEALCKAVTEADPQLAFSSFVAVAVSVI ALNALGEALVRRRLALGAA >Mature_259_residues MIGKVITLIISVLIAALVSGNLGNPGAGLGSSEELEVPEALASRSLTYGLDPWDVASVALRNTVTVVVIAVGASVLLGSL CYLRFGKRASFEALAYVPEYVYALLLYLLSWRFPWPSPLPGADPSKAAEYALVIIMSECPKVAYVVSEGVEGREELKGVR LFWKAVGLDERGVRSKLLLASKWLLLAQFFNLTSLVLERSVLVEPLVGYWGVGEALCKAVTEADPQLAFSSFVAVAVSVI ALNALGEALVRRRLALGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27651; Mature: 27651
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGKVITLIISVLIAALVSGNLGNPGAGLGSSEELEVPEALASRSLTYGLDPWDVASVAL CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHH RNTVTVVVIAVGASVLLGSLCYLRFGKRASFEALAYVPEYVYALLLYLLSWRFPWPSPLP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GADPSKAAEYALVIIMSECPKVAYVVSEGVEGREELKGVRLFWKAVGLDERGVRSKLLLA CCCCHHHHHHEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH SKWLLLAQFFNLTSLVLERSVLVEPLVGYWGVGEALCKAVTEADPQLAFSSFVAVAVSVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ALNALGEALVRRRLALGAA HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIGKVITLIISVLIAALVSGNLGNPGAGLGSSEELEVPEALASRSLTYGLDPWDVASVAL CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHH RNTVTVVVIAVGASVLLGSLCYLRFGKRASFEALAYVPEYVYALLLYLLSWRFPWPSPLP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GADPSKAAEYALVIIMSECPKVAYVVSEGVEGREELKGVRLFWKAVGLDERGVRSKLLLA CCCCHHHHHHEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH SKWLLLAQFFNLTSLVLERSVLVEPLVGYWGVGEALCKAVTEADPQLAFSSFVAVAVSVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ALNALGEALVRRRLALGAA HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA