| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937720
Identifier: 156937720
GI number: 156937720
Start: 824139
End: 824510
Strand: Direct
Name: 156937720
Synonym: Igni_0929
Alternate gene names: NA
Gene position: 824139-824510 (Clockwise)
Preceding gene: 156937718
Following gene: 156937721
Centisome position: 63.52
GC content: 55.65
Gene sequence:
>372_bases TTGGCGGCTGAGACGCCCTTGAAGATAGTATTGAACGAGATGATAAGGGTAGAGGGCATAAGGGCAGTGCTGGTGGTCTC CAAGGATGGCTTCCTGATCGACTACGTATCTCAAATGGGGAAGGAGATAGACCCCGAAAGCGTCGCGGCGATGGTGGTGA GCGTTTACGGCGCCCTACAGAGGTTCGCCGAGGAGTTCAACCTAGGAGAGATGGACATGGCCACTGCCGAGTACAGCCGA AACATGATGCTCCTCACCGACATAGGCGACGCTATGGTAGTCGTGATCACTGACAGAACTGCGCTGCTGGGCAGGATAAG GTACGAATTGAAGAAGCAGAAGGACAGGCTCAAAGCCGCGCTGGCCGCCTAG
Upstream 100 bases:
>100_bases GTGACGAACCTCCACCGGCGGCGACCGGTTCCGTACATTGAGAAACCTTTCTACTTACTTAAATATCGCTCCCCAAGGAA ACTACTCTGGGTATCGGGGT
Downstream 100 bases:
>100_bases CCCGGGGGAGGGGCATGAGTTACGAGGAAGAACCTTTCCTTTTTGGGGAGAGCGAGACCACGGAGGAGGCCCCGCTCGTA GAGGAGGAAGAGGGAACCAA
Product: roadblock/LC7 family protein
Products: NA
Alternate protein names: Roadblock/Lc7 Family Protein; Regulator Protein
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MAAETPLKIVLNEMIRVEGIRAVLVVSKDGFLIDYVSQMGKEIDPESVAAMVVSVYGALQRFAEEFNLGEMDMATAEYSR NMMLLTDIGDAMVVVITDRTALLGRIRYELKKQKDRLKAALAA
Sequences:
>Translated_123_residues MAAETPLKIVLNEMIRVEGIRAVLVVSKDGFLIDYVSQMGKEIDPESVAAMVVSVYGALQRFAEEFNLGEMDMATAEYSR NMMLLTDIGDAMVVVITDRTALLGRIRYELKKQKDRLKAALAA >Mature_122_residues AAETPLKIVLNEMIRVEGIRAVLVVSKDGFLIDYVSQMGKEIDPESVAAMVVSVYGALQRFAEEFNLGEMDMATAEYSRN MMLLTDIGDAMVVVITDRTALLGRIRYELKKQKDRLKAALAA
Specific function: Unknown
COG id: COG2018
COG function: function code R; Uncharacterized distant relative of homeotic protein bithoraxoid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13644; Mature: 13513
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.3 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAETPLKIVLNEMIRVEGIRAVLVVSKDGFLIDYVSQMGKEIDPESVAAMVVSVYGALQ CCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH RFAEEFNLGEMDMATAEYSRNMMLLTDIGDAMVVVITDRTALLGRIRYELKKQKDRLKAA HHHHHCCCCCHHHHHHHHHCCEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHH LAA HCC >Mature Secondary Structure AAETPLKIVLNEMIRVEGIRAVLVVSKDGFLIDYVSQMGKEIDPESVAAMVVSVYGALQ CCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH RFAEEFNLGEMDMATAEYSRNMMLLTDIGDAMVVVITDRTALLGRIRYELKKQKDRLKAA HHHHHCCCCCHHHHHHHHHCCEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHH LAA HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA