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The map label for this gene is rps15p

Identifier: 156937653

GI number: 156937653

Start: 762709

End: 763188

Strand: Direct

Name: rps15p

Synonym: Igni_0860

Alternate gene names: 156937653

Gene position: 762709-763188 (Clockwise)

Preceding gene: 156937652

Following gene: 156937654

Centisome position: 58.78

GC content: 56.88

Gene sequence:

>480_bases
GTGAACAAGAGGAAGGAGAAGGGCAAGTCCCACTCAAAGAGGCCCGTGAGGAATACCCCGCCGCGCTGGGTGCCCTTCGG
CCCCGAGGAGATCAAGGCGCTAATAGTGGAGCTCAGCAAGAAGGGCTACGGACCCTCGATGATCGGAATAATATTGAGGG
ACCAGTTCGGAGTCCCTCTGGTAAAGCCCATCGTGGGCAAGAAGCTAGTAAAAATAATGGAAGAGCAGGGCGTCGCCCCT
CCGATACCGGAGGACCTCTTCCACTTGATGAAGAGGGCAGTGAGGGTCAGGGCTCACTTGGCCGAGCACCCCAAGGACAA
GCACTCCGCTAGGGGACTAATGGAGATAGAGTCCAAGATAAGGAGGTTAGTCAAGTACTACAAGAGGGTCGGCAAGCTGC
CTCCGGACTGGAAGTACGACCCGGAGAGGGCGAGACTTCTTGTCCAGCAGTACTCAGCGCTCTTCGAGTCCGGAGCTTAG

Upstream 100 bases:

>100_bases
GGAGATAAGGGTAGGCATCGAGAGGCTGTCCCAAGTAGTTAAGAGTTACGTCAGAGGTAGCGTTTAAAATCCCAGATAGT
GAAGGCGGGGGGAGACGAGC

Downstream 100 bases:

>100_bases
CCTCGTCCAATTTTTGAAGAGCCACGAGGACGCGGCCTCACAGAAAGTGTTGGAGAAGGCTCTCGAATTCGTCGACTCCT
TAAAGGACTACGGGTTTGTT

Product: 30S ribosomal protein S15P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MNKRKEKGKSHSKRPVRNTPPRWVPFGPEEIKALIVELSKKGYGPSMIGIILRDQFGVPLVKPIVGKKLVKIMEEQGVAP
PIPEDLFHLMKRAVRVRAHLAEHPKDKHSARGLMEIESKIRRLVKYYKRVGKLPPDWKYDPERARLLVQQYSALFESGA

Sequences:

>Translated_159_residues
MNKRKEKGKSHSKRPVRNTPPRWVPFGPEEIKALIVELSKKGYGPSMIGIILRDQFGVPLVKPIVGKKLVKIMEEQGVAP
PIPEDLFHLMKRAVRVRAHLAEHPKDKHSARGLMEIESKIRRLVKYYKRVGKLPPDWKYDPERARLLVQQYSALFESGA
>Mature_159_residues
MNKRKEKGKSHSKRPVRNTPPRWVPFGPEEIKALIVELSKKGYGPSMIGIILRDQFGVPLVKPIVGKKLVKIMEEQGVAP
PIPEDLFHLMKRAVRVRAHLAEHPKDKHSARGLMEIESKIRRLVKYYKRVGKLPPDWKYDPERARLLVQQYSALFESGA

Specific function: Unknown

COG id: COG0184

COG function: function code J; Ribosomal protein S15P/S13E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S15P family

Homologues:

Organism=Homo sapiens, GI4506685, Length=142, Percent_Identity=46.4788732394366, Blast_Score=133, Evalue=5e-32,
Organism=Caenorhabditis elegans, GI17554774, Length=142, Percent_Identity=45.0704225352113, Blast_Score=125, Evalue=8e-30,
Organism=Saccharomyces cerevisiae, GI6320269, Length=143, Percent_Identity=44.0559440559441, Blast_Score=128, Evalue=4e-31,
Organism=Drosophila melanogaster, GI85724904, Length=142, Percent_Identity=46.4788732394366, Blast_Score=130, Evalue=5e-31,
Organism=Drosophila melanogaster, GI17136832, Length=142, Percent_Identity=46.4788732394366, Blast_Score=130, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS15_IGNH4 (A8AAU0)

Other databases:

- EMBL:   CP000816
- RefSeq:   YP_001435449.1
- ProteinModelPortal:   A8AAU0
- SMR:   A8AAU0
- STRING:   A8AAU0
- GeneID:   5562434
- GenomeReviews:   CP000816_GR
- KEGG:   iho:Igni_0860
- eggNOG:   arNOG07733
- HOGENOM:   HBG747651
- OMA:   IRRLVKY
- ProtClustDB:   PRK08561
- BioCyc:   IHOS453591:IGNI_0860-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_01343_A
- InterPro:   IPR012606
- InterPro:   IPR000589
- InterPro:   IPR023029
- InterPro:   IPR009068
- Gene3D:   G3DSA:1.10.287.10

Pfam domain/function: PF08069 Ribosomal_S13_N; PF00312 Ribosomal_S15; SSF47060 S15/NS1_bind

EC number: NA

Molecular weight: Translated: 18279; Mature: 18279

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: PS00362 RIBOSOMAL_S15

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRKEKGKSHSKRPVRNTPPRWVPFGPEEIKALIVELSKKGYGPSMIGIILRDQFGVPL
CCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCH
VKPIVGKKLVKIMEEQGVAPPIPEDLFHLMKRAVRVRAHLAEHPKDKHSARGLMEIESKI
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RRLVKYYKRVGKLPPDWKYDPERARLLVQQYSALFESGA
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKRKEKGKSHSKRPVRNTPPRWVPFGPEEIKALIVELSKKGYGPSMIGIILRDQFGVPL
CCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCH
VKPIVGKKLVKIMEEQGVAPPIPEDLFHLMKRAVRVRAHLAEHPKDKHSARGLMEIESKI
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RRLVKYYKRVGKLPPDWKYDPERARLLVQQYSALFESGA
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA