| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937553
Identifier: 156937553
GI number: 156937553
Start: 682372
End: 682644
Strand: Direct
Name: 156937553
Synonym: Igni_0760
Alternate gene names: NA
Gene position: 682372-682644 (Clockwise)
Preceding gene: 156937552
Following gene: 156937554
Centisome position: 52.59
GC content: 53.85
Gene sequence:
>273_bases GTGAGCGCGGCTAGCTATGATAACGAGGCTAAGATCAGGCAAGCGAAGACCATGCTTATGAGGGTGATAAACGACCCGGC CGTCCCCAGGAACATCCGGAGGGCTTGTATAGAAGCCGTGAGGCACTTAGAGAACGAGCGCTTGAGCCCGGGCGTGAGGG CGGCCAACGCGATAAGTGCTTTGGACGAGATAGTGCAAGACCCCAACATGCCTATACATACGAGAATAACTATATGGAAC GTCGTAACCCTCCTCGAGACAGTGAAGGACTAA
Upstream 100 bases:
>100_bases CTAAAGGTAATTTTTGTACTCTTTCGTCTCTCGCTTCACGACACGCTTCCCTTACCCTTAAATTTAGGCCTTCGTTCGTG GCGAACGAAGGGGTGAGATC
Downstream 100 bases:
>100_bases AGGGGTCGATAATGGAAAAACCTAGGGTCAGGGTAAGAGGTATCTACGCAACGGCTGTAGCTAAGGTTTTATTGGACGAG GGGCTCGAGCTGAGTGACCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MSAASYDNEAKIRQAKTMLMRVINDPAVPRNIRRACIEAVRHLENERLSPGVRAANAISALDEIVQDPNMPIHTRITIWN VVTLLETVKD
Sequences:
>Translated_90_residues MSAASYDNEAKIRQAKTMLMRVINDPAVPRNIRRACIEAVRHLENERLSPGVRAANAISALDEIVQDPNMPIHTRITIWN VVTLLETVKD >Mature_89_residues SAASYDNEAKIRQAKTMLMRVINDPAVPRNIRRACIEAVRHLENERLSPGVRAANAISALDEIVQDPNMPIHTRITIWNV VTLLETVKD
Specific function: Unknown
COG id: COG1698
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0147 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023130 - InterPro: IPR005354 - ProDom: PD029943 [H]
Pfam domain/function: PF03685 UPF0147 [H]
EC number: NA
Molecular weight: Translated: 10134; Mature: 10003
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAASYDNEAKIRQAKTMLMRVINDPAVPRNIRRACIEAVRHLENERLSPGVRAANAISA CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LDEIVQDPNMPIHTRITIWNVVTLLETVKD HHHHHHCCCCCEEHHHHHHHHHHHHHHHCC >Mature Secondary Structure SAASYDNEAKIRQAKTMLMRVINDPAVPRNIRRACIEAVRHLENERLSPGVRAANAISA CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LDEIVQDPNMPIHTRITIWNVVTLLETVKD HHHHHHCCCCCEEHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA