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The map label for this gene is asnC [C]

Identifier: 156937499

GI number: 156937499

Start: 635903

End: 636367

Strand: Direct

Name: asnC [C]

Synonym: Igni_0706

Alternate gene names: 156937499

Gene position: 635903-636367 (Clockwise)

Preceding gene: 156937498

Following gene: 156937502

Centisome position: 49.01

GC content: 47.1

Gene sequence:

>465_bases
GTGCCCGACAAGCCCGTAGAGCTAGACGAAATAGATAAGAAAATTATAGAGATCCTTCAAAAGGACGCCAGAACGTCGTT
TTCCAAAATTGCCAAGATGTTGGACCGCAGCGAAGCCACGATACACCTGCGCGTAAAGAAGCTCCGCGAGATGGGCGTAC
TTAGAGGTTTCTACGCTGACATCGATGCATCGAAGATAGGGAAGGACACTATAGCTTTTATATTAATCAAGATAGACGCT
AACAAGTACCCGGAGACGGTCAAAGATATCGTGAAATTAGAGGACATCTACGAAGCTTACGACGTAACGGGCGAGTACTC
CCTCTTGGTAAAGACTGTCGTTAGGGATAGGGAGGAGTTAGCGAGGCTGCTGGACTTAATAGGTAAGATGGAGGGGGTGC
AAGAGACCTACACGATGTATGTGTTAAGGGTTCTCAAGGAAGTTAAGTCAGTTAGGGTCGACTGA

Upstream 100 bases:

>100_bases
AAGTTTGGGATGGGAGAGGCAGGCATCAGAGAGTTCTTAAGTATACTGCCCAAGGCGTTCTCGCTGTCCCTCCTCAAGAA
GCTAATTTAAGGGTGACAGC

Downstream 100 bases:

>100_bases
GCTTGGGCTTAACGCGGGGGGCTAGGAATAAGACTGCCTCGCCCCGCTCCAGCTCGCCCAACAGGGCGCTCTCGGGAGGC
GCTGGTTTGCCTTTGTGTAC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MPDKPVELDEIDKKIIEILQKDARTSFSKIAKMLDRSEATIHLRVKKLREMGVLRGFYADIDASKIGKDTIAFILIKIDA
NKYPETVKDIVKLEDIYEAYDVTGEYSLLVKTVVRDREELARLLDLIGKMEGVQETYTMYVLRVLKEVKSVRVD

Sequences:

>Translated_154_residues
MPDKPVELDEIDKKIIEILQKDARTSFSKIAKMLDRSEATIHLRVKKLREMGVLRGFYADIDASKIGKDTIAFILIKIDA
NKYPETVKDIVKLEDIYEAYDVTGEYSLLVKTVVRDREELARLLDLIGKMEGVQETYTMYVLRVLKEVKSVRVD
>Mature_153_residues
PDKPVELDEIDKKIIEILQKDARTSFSKIAKMLDRSEATIHLRVKKLREMGVLRGFYADIDASKIGKDTIAFILIKIDAN
KYPETVKDIVKLEDIYEAYDVTGEYSLLVKTVVRDREELARLLDLIGKMEGVQETYTMYVLRVLKEVKSVRVD

Specific function: Activator Of Asna Transcription; Autogenous Regulator Of Its Own Transcription; And Repressor Of The Expression Of Gida At A Post-Transcriptional Level. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790182, Length=138, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=1e-19,
Organism=Escherichia coli, GI1787116, Length=148, Percent_Identity=30.4054054054054, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI87081742, Length=139, Percent_Identity=28.0575539568345, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR001845
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 17768; Mature: 17637

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDKPVELDEIDKKIIEILQKDARTSFSKIAKMLDRSEATIHLRVKKLREMGVLRGFYAD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
IDASKIGKDTIAFILIKIDANKYPETVKDIVKLEDIYEAYDVTGEYSLLVKTVVRDREEL
CCHHHCCCHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ARLLDLIGKMEGVQETYTMYVLRVLKEVKSVRVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PDKPVELDEIDKKIIEILQKDARTSFSKIAKMLDRSEATIHLRVKKLREMGVLRGFYAD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
IDASKIGKDTIAFILIKIDANKYPETVKDIVKLEDIYEAYDVTGEYSLLVKTVVRDREEL
CCHHHCCCHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ARLLDLIGKMEGVQETYTMYVLRVLKEVKSVRVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]