| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937498
Identifier: 156937498
GI number: 156937498
Start: 634825
End: 635892
Strand: Direct
Name: 156937498
Synonym: Igni_0705
Alternate gene names: NA
Gene position: 634825-635892 (Clockwise)
Preceding gene: 156937497
Following gene: 156937499
Centisome position: 48.93
GC content: 51.59
Gene sequence:
>1068_bases GTGCCAACGACGACTTACGACTATTTCGTCCTCGGAGGAGGACCCGCGGGGGTCGCGGCCGCGTACTTCCTCAGTCAAGA GGGGTACAAGGTACTCCTAGTCGAACAGAGGCCCCACTTAGGGGCCAAGCCTTGCGGCGGGGGCGTGCCCACTCAGCTGA ACATGACGCTGACTGTTCCGGCGGACTCCATTTTGAACAAGATAAGGTCGTTGACCCTCTACTTTAACATGAAACACGTA GGGACGTGGGACGCGAAGGAAACGATATTCTATTTGATAGATAGGACTAAGTTCTTGGAACACTACTCCACTTCCTTCGA CGTCGCCCTCAAGACGTCGGCAAAGGTAACTCACTTGTATGCAACCATTAATAACGAAAAAGTTGACATTTCTAAGGTGA TAATTGCCACAGGGTACTCGTGGAGGTTCCGAGAACGCGACATGCTGGCGCAAACCCTACAGTACTACGTGAAAGATATA AAGATAGATGATCCGAGCGAGATGAAATTCTACTTCTTCAAGGACTTGATAGGCTACGCGTGGTTCTTCCCGTACGGAGA GAGGGAGGCGAAGGTGGGCATCGGCGGCCTAGACGTGACGGTAAATCAACTCAAAGTGAGGTTAGATATGCTCCTAAAAG AACTTAATATCGATACAAGCTCGATAACTAGGATTGATGGGGCACCCATAGACATGGGCGGGATAAAGCTGGAATGGGCC AAAGAGCCCACCTACGTAGTGGGCGAGGCGTTGGGCGCCGTAATGCCATTAACTGGAGAGGGCATAAGGCCGAGCATACT CACCGCCAAGGTCTTGGCCCACGCGATAGCCCGCGAAAAGGACTATCGGGAGGTATTGGGAAGCATGAAGTTATACAAAG CAACCCAGCTCCAAGCGAAGATTCTGAAGAAGGTCAGGAAGGAGGGGAAGGTGCCGACGCTAAAGGAGCTAAGCCCGAAG AACGTGGAGGCCATCTATAAGTTTGGGATGGGAGAGGCAGGCATCAGAGAGTTCTTAAGTATACTGCCCAAGGCGTTCTC GCTGTCCCTCCTCAAGAAGCTAATTTAA
Upstream 100 bases:
>100_bases GGAGTATAGGGGTCTAGTGAAGAAGGTAGACGGTAAGTACGAGCTGAGCTAAAGTTCTATGGGCTCATTTTTATACGTAC CTTGAGGGATCCTTAAGGGG
Downstream 100 bases:
>100_bases GGGTGACAGCGTGCCCGACAAGCCCGTAGAGCTAGACGAAATAGATAAGAAAATTATAGAGATCCTTCAAAAGGACGCCA GAACGTCGTTTTCCAAAATT
Product: dehydrogenase (flavoprotein)-like protein
Products: NA
Alternate protein names: DGGGPL reductase; 2,3-di-O-geranylgeranylglyceryl phosphate reductase; Geranylgeranyl reductase; GGR [H]
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MPTTTYDYFVLGGGPAGVAAAYFLSQEGYKVLLVEQRPHLGAKPCGGGVPTQLNMTLTVPADSILNKIRSLTLYFNMKHV GTWDAKETIFYLIDRTKFLEHYSTSFDVALKTSAKVTHLYATINNEKVDISKVIIATGYSWRFRERDMLAQTLQYYVKDI KIDDPSEMKFYFFKDLIGYAWFFPYGEREAKVGIGGLDVTVNQLKVRLDMLLKELNIDTSSITRIDGAPIDMGGIKLEWA KEPTYVVGEALGAVMPLTGEGIRPSILTAKVLAHAIAREKDYREVLGSMKLYKATQLQAKILKKVRKEGKVPTLKELSPK NVEAIYKFGMGEAGIREFLSILPKAFSLSLLKKLI
Sequences:
>Translated_355_residues MPTTTYDYFVLGGGPAGVAAAYFLSQEGYKVLLVEQRPHLGAKPCGGGVPTQLNMTLTVPADSILNKIRSLTLYFNMKHV GTWDAKETIFYLIDRTKFLEHYSTSFDVALKTSAKVTHLYATINNEKVDISKVIIATGYSWRFRERDMLAQTLQYYVKDI KIDDPSEMKFYFFKDLIGYAWFFPYGEREAKVGIGGLDVTVNQLKVRLDMLLKELNIDTSSITRIDGAPIDMGGIKLEWA KEPTYVVGEALGAVMPLTGEGIRPSILTAKVLAHAIAREKDYREVLGSMKLYKATQLQAKILKKVRKEGKVPTLKELSPK NVEAIYKFGMGEAGIREFLSILPKAFSLSLLKKLI >Mature_354_residues PTTTYDYFVLGGGPAGVAAAYFLSQEGYKVLLVEQRPHLGAKPCGGGVPTQLNMTLTVPADSILNKIRSLTLYFNMKHVG TWDAKETIFYLIDRTKFLEHYSTSFDVALKTSAKVTHLYATINNEKVDISKVIIATGYSWRFRERDMLAQTLQYYVKDIK IDDPSEMKFYFFKDLIGYAWFFPYGEREAKVGIGGLDVTVNQLKVRLDMLLKELNIDTSSITRIDGAPIDMGGIKLEWAK EPTYVVGEALGAVMPLTGEGIRPSILTAKVLAHAIAREKDYREVLGSMKLYKATQLQAKILKKVRKEGKVPTLKELSPKN VEAIYKFGMGEAGIREFLSILPKAFSLSLLKKLI
Specific function: Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the geranylgeranyl reductase family. DGGGPL reductase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011777 - InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: NA
Molecular weight: Translated: 39774; Mature: 39643
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTTYDYFVLGGGPAGVAAAYFLSQEGYKVLLVEQRPHLGAKPCGGGVPTQLNMTLTVP CCCCEEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECC ADSILNKIRSLTLYFNMKHVGTWDAKETIFYLIDRTKFLEHYSTSFDVALKTSAKVTHLY HHHHHHHHHEEEEEEEEEECCCCCHHHHEEEEHHHHHHHHHHCCCEEEEEECCCEEEEEE ATINNEKVDISKVIIATGYSWRFRERDMLAQTLQYYVKDIKIDDPSEMKFYFFKDLIGYA EEECCCEEEEEEEEEECCCCEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH WFFPYGEREAKVGIGGLDVTVNQLKVRLDMLLKELNIDTSSITRIDGAPIDMGGIKLEWA HCCCCCCCCCEEECCCCEEEHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCEEEEEC KEPTYVVGEALGAVMPLTGEGIRPSILTAKVLAHAIAREKDYREVLGSMKLYKATQLQAK CCCCHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHH ILKKVRKEGKVPTLKELSPKNVEAIYKFGMGEAGIREFLSILPKAFSLSLLKKLI HHHHHHHCCCCCCHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure PTTTYDYFVLGGGPAGVAAAYFLSQEGYKVLLVEQRPHLGAKPCGGGVPTQLNMTLTVP CCCEEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECC ADSILNKIRSLTLYFNMKHVGTWDAKETIFYLIDRTKFLEHYSTSFDVALKTSAKVTHLY HHHHHHHHHEEEEEEEEEECCCCCHHHHEEEEHHHHHHHHHHCCCEEEEEECCCEEEEEE ATINNEKVDISKVIIATGYSWRFRERDMLAQTLQYYVKDIKIDDPSEMKFYFFKDLIGYA EEECCCEEEEEEEEEECCCCEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH WFFPYGEREAKVGIGGLDVTVNQLKVRLDMLLKELNIDTSSITRIDGAPIDMGGIKLEWA HCCCCCCCCCEEECCCCEEEHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCEEEEEC KEPTYVVGEALGAVMPLTGEGIRPSILTAKVLAHAIAREKDYREVLGSMKLYKATQLQAK CCCCHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHH ILKKVRKEGKVPTLKELSPKNVEAIYKFGMGEAGIREFLSILPKAFSLSLLKKLI HHHHHHHCCCCCCHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA