| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937481
Identifier: 156937481
GI number: 156937481
Start: 619252
End: 620373
Strand: Direct
Name: 156937481
Synonym: Igni_0688
Alternate gene names: NA
Gene position: 619252-620373 (Clockwise)
Preceding gene: 156937479
Following gene: 156937482
Centisome position: 47.73
GC content: 49.91
Gene sequence:
>1122_bases GTGGGCGACGAGACCTTGAGGAGCGCAGTAGCGCTGCTGGCGCTATCGGCCATGGCGTTGGCCGCCGCTACGATAACCCT TACAGTAAACGACGGCAAGGTCGCCCTCTCTAAGATCGTCGTAGAAGCTGAGCGGGAAAAGTTCCCGTTCCAGTACGGAG AGAGTTTAGTGTCAAGCCAGCTGGTCGCGGTCGACAAGCTCTGGGGTGAGGGCTCGAGCGTCAAGGAGTCCTTTTCAACC AACAGCGCACTCACCCTCAGCTCTTCGCCCTTGAAGAAGGGACGCGCCGAAATAACGCTGAGTATAACGTCCGACCCGAC GACTGTGAGCTTACACAGCAGGATTAAGGGTTCCGTCCTAGTATTGTTCTTTTATATACGCAACATGGACATAGTCCTTA ACTCTGTTATAAACAAGCAAGACAACTCAGGGAACTTGACGATAGACGGCTTCGCCGAGCTCCCGTCTCCTAAGGTAACA GTGGAGAAGATGTTAAACACAATGATACCTAAGATAAAAGCTGGTATCGAGGATTTGGGACTAAAGGTAGTGGAGTTGAA GTACGAAGTTACTGGCAAGTCCCTACCTCCCACTAGCAAGGTCAAAATGTACGTAATCTTGAAAGGAGAAAGGGATAAGA TAGTTGAATCGTTGAACAGTCTAGGGATACCAACATCGGAACTGTTGAACTTAATAAACATGAACGATACTGTAGTCAGA AAGGTTAACGCCCAAGCAAACCTGGAACTGTCCCTTAAGAGGTCCGGAAAAGAGCTCTTCACAGAAATAAGGGCCAAAGT GAGGGGAGAAGGCGTCTACCTTAACGATACCGTCCGTTACGAGCTCCGGAGCCGCTTGGAGCCCGTACTGAAGGCCCTCA ACGTTACGGAGCTAGAGGGCTACTTGCTGCCTACCAATAACGTGACCAGCTCCCTCACGGTCAACGTTACAGGCAATAAA GTTAAAGCCAACTTCGTGTTCACGAACGTATACTTTAACAACACCGAGGAGTTGTGGAAGACGCTGAAAAGAATTGAAGA TGAACTGGGCGTGAACTTCGAGGTCCTCTGTAGCGGAAAGGTATATGACATAGAAAGGGCTGCGTCCTCTTGCAAGGGCT GA
Upstream 100 bases:
>100_bases AAAGGTTCCATGTACTTGATGCTCAAGAGCGCCGCCCTCATTCCGGTGCTCCAGAAAGTGTGGAAAGCATAGTTTATTTA ACAAGGTTGTTGGGCATTAA
Downstream 100 bases:
>100_bases TTTTTGTCTAAAGGCCCCACATAACTCTGGGAGGGTGACTAAAACCTTGGGAAGGGTCTACGATTTAGCAAAGGTCCCTA TGTCAAGGGTAGAAAGGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MGDETLRSAVALLALSAMALAAATITLTVNDGKVALSKIVVEAEREKFPFQYGESLVSSQLVAVDKLWGEGSSVKESFST NSALTLSSSPLKKGRAEITLSITSDPTTVSLHSRIKGSVLVLFFYIRNMDIVLNSVINKQDNSGNLTIDGFAELPSPKVT VEKMLNTMIPKIKAGIEDLGLKVVELKYEVTGKSLPPTSKVKMYVILKGERDKIVESLNSLGIPTSELLNLINMNDTVVR KVNAQANLELSLKRSGKELFTEIRAKVRGEGVYLNDTVRYELRSRLEPVLKALNVTELEGYLLPTNNVTSSLTVNVTGNK VKANFVFTNVYFNNTEELWKTLKRIEDELGVNFEVLCSGKVYDIERAASSCKG
Sequences:
>Translated_373_residues MGDETLRSAVALLALSAMALAAATITLTVNDGKVALSKIVVEAEREKFPFQYGESLVSSQLVAVDKLWGEGSSVKESFST NSALTLSSSPLKKGRAEITLSITSDPTTVSLHSRIKGSVLVLFFYIRNMDIVLNSVINKQDNSGNLTIDGFAELPSPKVT VEKMLNTMIPKIKAGIEDLGLKVVELKYEVTGKSLPPTSKVKMYVILKGERDKIVESLNSLGIPTSELLNLINMNDTVVR KVNAQANLELSLKRSGKELFTEIRAKVRGEGVYLNDTVRYELRSRLEPVLKALNVTELEGYLLPTNNVTSSLTVNVTGNK VKANFVFTNVYFNNTEELWKTLKRIEDELGVNFEVLCSGKVYDIERAASSCKG >Mature_372_residues GDETLRSAVALLALSAMALAAATITLTVNDGKVALSKIVVEAEREKFPFQYGESLVSSQLVAVDKLWGEGSSVKESFSTN SALTLSSSPLKKGRAEITLSITSDPTTVSLHSRIKGSVLVLFFYIRNMDIVLNSVINKQDNSGNLTIDGFAELPSPKVTV EKMLNTMIPKIKAGIEDLGLKVVELKYEVTGKSLPPTSKVKMYVILKGERDKIVESLNSLGIPTSELLNLINMNDTVVRK VNAQANLELSLKRSGKELFTEIRAKVRGEGVYLNDTVRYELRSRLEPVLKALNVTELEGYLLPTNNVTSSLTVNVTGNKV KANFVFTNVYFNNTEELWKTLKRIEDELGVNFEVLCSGKVYDIERAASSCKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40904; Mature: 40773
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDETLRSAVALLALSAMALAAATITLTVNDGKVALSKIVVEAEREKFPFQYGESLVSSQ CCHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCEEEHHHHHHHHHHCCCHHHHHHHHHHH LVAVDKLWGEGSSVKESFSTNSALTLSSSPLKKGRAEITLSITSDPTTVSLHSRIKGSVL HHHHHHHCCCCCHHHHHCCCCCEEEECCCCCCCCCEEEEEEEECCCCEEEEHHCCCCCCE VLFFYIRNMDIVLNSVINKQDNSGNLTIDGFAELPSPKVTVEKMLNTMIPKIKAGIEDLG EEHHHHHCHHHHHHHHHCCCCCCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHCCHHHHC LKVVELKYEVTGKSLPPTSKVKMYVILKGERDKIVESLNSLGIPTSELLNLINMNDTVVR EEEEEEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHCCCCHHEE KVNAQANLELSLKRSGKELFTEIRAKVRGEGVYLNDTVRYELRSRLEPVLKALNVTELEG EECCCCCEEEEEECCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHCCCEECCC YLLPTNNVTSSLTVNVTGNKVKANFVFTNVYFNNTEELWKTLKRIEDELGVNFEVLCSGK EEECCCCCCCEEEEEEECCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHCCCEEEEECCC VYDIERAASSCKG EEEHHHHHHHCCC >Mature Secondary Structure GDETLRSAVALLALSAMALAAATITLTVNDGKVALSKIVVEAEREKFPFQYGESLVSSQ CHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCEEEHHHHHHHHHHCCCHHHHHHHHHHH LVAVDKLWGEGSSVKESFSTNSALTLSSSPLKKGRAEITLSITSDPTTVSLHSRIKGSVL HHHHHHHCCCCCHHHHHCCCCCEEEECCCCCCCCCEEEEEEEECCCCEEEEHHCCCCCCE VLFFYIRNMDIVLNSVINKQDNSGNLTIDGFAELPSPKVTVEKMLNTMIPKIKAGIEDLG EEHHHHHCHHHHHHHHHCCCCCCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHCCHHHHC LKVVELKYEVTGKSLPPTSKVKMYVILKGERDKIVESLNSLGIPTSELLNLINMNDTVVR EEEEEEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHCCCCHHEE KVNAQANLELSLKRSGKELFTEIRAKVRGEGVYLNDTVRYELRSRLEPVLKALNVTELEG EECCCCCEEEEEECCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHCCCEECCC YLLPTNNVTSSLTVNVTGNKVKANFVFTNVYFNNTEELWKTLKRIEDELGVNFEVLCSGK EEECCCCCCCEEEEEEECCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHCCCEEEEECCC VYDIERAASSCKG EEEHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA