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The map label for this gene is 156937479

Identifier: 156937479

GI number: 156937479

Start: 618171

End: 618605

Strand: Direct

Name: 156937479

Synonym: Igni_0686

Alternate gene names: NA

Gene position: 618171-618605 (Clockwise)

Preceding gene: 156937478

Following gene: 156937481

Centisome position: 47.64

GC content: 56.55

Gene sequence:

>435_bases
GTGAAGACCGTAGAGCTTACAAACGGGTCGAAGAAAAAGGTTGAAGACAGGATTGTGGGGCGGCACGTCTACGGTAACTT
GTACGGCGTCGACCCGGCGAAGCTCTGGGACGAGGAGGGGTTGAAAGAACTCGTAAGGGAGGCTGCAGAGGTAGCAAACA
TGAAGTTGGTAGAGGTGAGGTCGTGGAAGTTCACCGGGTACCACGGGGGCGTATCAGTGATGGCACTAGTTCTAGAAAGC
CACATAACTATACATACTTGGCCGGATTACGAGTACGCGACCGTCGACGTGTACACTTGCGGCGAGAGGAGCGACCCGTG
GAGGGCGTTCGAACTAATCGTCGAGAGGTTAGAGCCGGAGGACTACGTGGTCCACTACAGCGACCGCAGTAGCCCTAAGA
GGCCCTTGGGGGGCACAGCGGGTCGAATCCAGTAG

Upstream 100 bases:

>100_bases
GTCGCTCGCGGAGTTAGTCAAGAGAGGTTACATAGGGCCTAGGTAGCTCGGTTAGTAAAGCCTTAAATCCCCCGTTCCCG
CAGCGGCCCCGGTAGGAGAG

Downstream 100 bases:

>100_bases
TTTTTCAAAGTACTCACTGTGTGTAGGTAAGCGTCTAAGACCTCTTCCAGCGGGGCGAGCCTTATGTTGCGCCACGAGTA
CCTCACCTCGAGCTGAAAGG

Product: S-adenosylmethionine decarboxylase related

Products: NA

Alternate protein names: ADC; ArgDC; Pyruvoyl-dependent arginine decarboxylase

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKTVELTNGSKKKVEDRIVGRHVYGNLYGVDPAKLWDEEGLKELVREAAEVANMKLVEVRSWKFTGYHGGVSVMALVLES
HITIHTWPDYEYATVDVYTCGERSDPWRAFELIVERLEPEDYVVHYSDRSSPKRPLGGTAGRIQ

Sequences:

>Translated_144_residues
MKTVELTNGSKKKVEDRIVGRHVYGNLYGVDPAKLWDEEGLKELVREAAEVANMKLVEVRSWKFTGYHGGVSVMALVLES
HITIHTWPDYEYATVDVYTCGERSDPWRAFELIVERLEPEDYVVHYSDRSSPKRPLGGTAGRIQ
>Mature_144_residues
MKTVELTNGSKKKVEDRIVGRHVYGNLYGVDPAKLWDEEGLKELVREAAEVANMKLVEVRSWKFTGYHGGVSVMALVLES
HITIHTWPDYEYATVDVYTCGERSDPWRAFELIVERLEPEDYVVHYSDRSSPKRPLGGTAGRIQ

Specific function: Specifically catalyzes the decarboxylation of L-arginine to agmatine. Has no S-adenosylmethionine decarboxylase (AdoMetDC) activity

COG id: COG1586

COG function: function code E; S-adenosylmethionine decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ARGDC_IGNH4 (A8AAB6)

Other databases:

- EMBL:   CP000816
- RefSeq:   YP_001435275.1
- ProteinModelPortal:   A8AAB6
- SMR:   A8AAB6
- STRING:   A8AAB6
- GeneID:   5562345
- GenomeReviews:   CP000816_GR
- KEGG:   iho:Igni_0686
- eggNOG:   arNOG11873
- HOGENOM:   HBG485559
- OMA:   KPNEMHI
- ProtClustDB:   CLSK964544
- BioCyc:   IHOS453591:IGNI_0686-MONOMER
- HAMAP:   MF_01298
- InterPro:   IPR003826
- InterPro:   IPR016067
- InterPro:   IPR017716
- Gene3D:   G3DSA:3.60.90.10
- TIGRFAMs:   TIGR03330

Pfam domain/function: PF02675 AdoMet_dc; SSF56276 S-AdenosylMet_decarbase_core

EC number: =4.1.1.19

Molecular weight: Translated: 16426; Mature: 16426

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: ACT_SITE 80-80 ACT_SITE 85-85 ACT_SITE 100-100

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVELTNGSKKKVEDRIVGRHVYGNLYGVDPAKLWDEEGLKELVREAAEVANMKLVEVR
CCEEECCCCCHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEE
SWKFTGYHGGVSVMALVLESHITIHTWPDYEYATVDVYTCGERSDPWRAFELIVERLEPE
EEEECCCCCCHHHHHHHHHCCEEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCC
DYVVHYSDRSSPKRPLGGTAGRIQ
CEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKTVELTNGSKKKVEDRIVGRHVYGNLYGVDPAKLWDEEGLKELVREAAEVANMKLVEVR
CCEEECCCCCHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEE
SWKFTGYHGGVSVMALVLESHITIHTWPDYEYATVDVYTCGERSDPWRAFELIVERLEPE
EEEECCCCCCHHHHHHHHHCCEEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCC
DYVVHYSDRSSPKRPLGGTAGRIQ
CEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA