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The map label for this gene is nac [H]

Identifier: 156937396

GI number: 156937396

Start: 540230

End: 540604

Strand: Reverse

Name: nac [H]

Synonym: Igni_0603

Alternate gene names: 156937396

Gene position: 540604-540230 (Counterclockwise)

Preceding gene: 156937398

Following gene: 156937394

Centisome position: 41.66

GC content: 55.73

Gene sequence:

>375_bases
GTGCTCCCGTTCGGCTTCAACATGAAGGCCCTAGAGAAGATGTTGAAGAAGGCGGGGTTAAAGGTCTACGAGCTAGAGGG
GGTTGAACGCGTGATAATAGAGGGGGTGGACGAAAAGATAATATTGGTCGAGCCCAAGGTATTGGAGCTGGAGCTGCCCG
GCCAAGCTAAGGCGTACCAAATACTCAACCCTAAGGAGGTGGTCAAAGAAAAGGGGGTCGAGGAAGGGCAGGAAGTCCAA
GAGGTCTCCGAGGACGACGTGAAGGTCGTGGTCGAGCAGACCGGGTGCTCGCCGGAGAAGGCTAAGCAAGCGCTTATCGA
GACGAAGGGGGACATCGCCGAGGCGATAGTCAAGCTTCAAGAGGAGGGCTGTTGA

Upstream 100 bases:

>100_bases
GCCGCCCAAGAAAGTTATCTCTGCGCCCATTCCCCATCACCGCTTATCTAAACCCTTTTGGACCGGTTCACGAAGGCAAT
TTAAGGGAGGTGGTAACGCG

Downstream 100 bases:

>100_bases
ACGTCCAAGAGCCTCAACCGGTCCATGAGCTCGCCCGGCTCGGAGCACAGGGAGACTATTAGCGCTATCCCCTCTTTTTC
GGCTATCCTCACCGCCAGCC

Product: nascent polypeptide associated complex NAC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MLPFGFNMKALEKMLKKAGLKVYELEGVERVIIEGVDEKIILVEPKVLELELPGQAKAYQILNPKEVVKEKGVEEGQEVQ
EVSEDDVKVVVEQTGCSPEKAKQALIETKGDIAEAIVKLQEEGC

Sequences:

>Translated_124_residues
MLPFGFNMKALEKMLKKAGLKVYELEGVERVIIEGVDEKIILVEPKVLELELPGQAKAYQILNPKEVVKEKGVEEGQEVQ
EVSEDDVKVVVEQTGCSPEKAKQALIETKGDIAEAIVKLQEEGC
>Mature_124_residues
MLPFGFNMKALEKMLKKAGLKVYELEGVERVIIEGVDEKIILVEPKVLELELPGQAKAYQILNPKEVVKEKGVEEGQEVQ
EVSEDDVKVVVEQTGCSPEKAKQALIETKGDIAEAIVKLQEEGC

Specific function: Contacts the emerging nascent chain on the ribosome [H]

COG id: COG1308

COG function: function code K; Transcription factor homologous to NACalpha-BTF3

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 UBA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005231
- InterPro:   IPR002715
- InterPro:   IPR009060
- InterPro:   IPR000449 [H]

Pfam domain/function: PF01849 NAC; PF00627 UBA [H]

EC number: NA

Molecular weight: Translated: 13722; Mature: 13722

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS51151 NAC_AB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPFGFNMKALEKMLKKAGLKVYELEGVERVIIEGVDEKIILVEPKVLELELPGQAKAYQ
CCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHCCCCCEEEEECCCEEEEECCCCCCEEE
ILNPKEVVKEKGVEEGQEVQEVSEDDVKVVVEQTGCSPEKAKQALIETKGDIAEAIVKLQ
CCCHHHHHHHCCCCCCHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHH
EEGC
HCCC
>Mature Secondary Structure
MLPFGFNMKALEKMLKKAGLKVYELEGVERVIIEGVDEKIILVEPKVLELELPGQAKAYQ
CCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHCCCCCEEEEECCCEEEEECCCCCCEEE
ILNPKEVVKEKGVEEGQEVQEVSEDDVKVVVEQTGCSPEKAKQALIETKGDIAEAIVKLQ
CCCHHHHHHHCCCCCCHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHH
EEGC
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]