| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937394
Identifier: 156937394
GI number: 156937394
Start: 537755
End: 539272
Strand: Reverse
Name: 156937394
Synonym: Igni_0601
Alternate gene names: NA
Gene position: 539272-537755 (Counterclockwise)
Preceding gene: 156937396
Following gene: 156937393
Centisome position: 41.56
GC content: 58.37
Gene sequence:
>1518_bases ATGGTAGAAGTGATCAAGTTAAGCGACAGACCGAGCGCCTTCGACAAGTACCCCGTCGTGAAGGACGACGTACGCAACGC CTTGAAGAGGGGGGGCGTGGTAGCGGTCGGGGACCCGGAGGGTCTGACGGAGCTCGCGAAGGAAGCGAAGGACTCCTTCT GGTACCGGCTTTTCTTGTGCCACGACGGCTGTCCCGAAGAGGTAGTGGAGACCCTCGCCAAGCTCGCGGACCACTGGGAG GTGCACTACTCCGTAAGCTTCCAGTACCCGAGGGGGAAGGTCGACCGCAGGGGCGCAATCCAGAAGCTAGTAAAGGAAGG GCTCAAGGCTAGGATTGTCGCAGTACCGGAGAACACCTTCGCTTGCGCGTCCCCTTCATGTAGGATGTGTAAGTCGGTTT GCCCTTCTAATGCGATAAGGCTCAAGGAGGGTAGGGTATCGATAGACCCGGACAAGTGTACCTCTTGCGGCCTGTGCGTG GCCGCTTGCCCACTTTACTCCCTCGACATGCCCGGCCTCGCGCCCAACGAGCTCTTCGCGGCCGTCCCTCCGGCCAAGGC CGGCGCGGCCGAAAGGGTGGTCTGGAGGACCCCCGACACGCTCTCCCCGTCGGACTTTAAGGAAAGGACGTTGGTCGTGT TAGGAATACCATTACGCGTCAGGATAATTGTAGAATACTTCACCAAGGTCTTGGGCTGGGAGTACTGTGACGACGAGGGC TGCGTGAGGCCCTCCAAAGCGGAGCCCCGGCGTTGCGACCACTCCCTCCCCGAGGACGTCTCCCCCTTGGTCTCGATAAA GATGGCCTACTCTTTGGAGGACTTCTACGAAGTCGTGGTAAACCCGAAGCTCTGCGACGCGTGTACAGCTTGCAGCGAGG CTTGTCCCACGCGCTCGCTGGTCCTCAGAACGCCCACCCCGGCTATGGTGATCTTAACTCACCTGCCGGCCGCGTGCGTG GGCTGCCATGCATGCGTGAGGGCTTGTCCGGTGCAGAAGAAGCTGGACGCGCTGGGTTTGAACATAAAGATGATTAGAGT CGTAGAGGGTGAGGGCGAGTGCGTTTGGAAGAACTTGGTAGTTAAGAGGATATTCAGGCCCAAGTGCGCGGTCTGCGACA AGTTCTTAGACGTGGACGTCGACGAATATATAAATGCTGTTGAAAGGTTTGTCGAGAGGGTTTCTCGAGGGGAGTTCGAG AACGTATTCGACATATCCAGTTTCTTAAACAAGTCCGAGGACTTGCTCAAGGTACTGCTTTGCAAGGAGTGTTACTCAAA GTATAAGCAAGGCGTCTTGCCCCCTCAGACGGTCGCGAAGCTCGTACTGCTCACGGTGGGCTGCGTATACGAACAAGAGG GGGTGAGGAGGGGCTGGGCGGACCCGGTGAAGGCGTTGTGGCACGTCGCCTCCCAGCTCGAGGTAGGTGGGATAAGCTAT TGCAGCGAGCTGAACGCCTACAAGGCCTTGTTCGGCGGGGTCGAATTTAACCTAAGGGGAGGACCGCGACAGCGGTAG
Upstream 100 bases:
>100_bases CGACGGGCCCTCTCGCCGTCCTACGGCAACCCTCAAGGGATTATTAAGTTTTTGAGGGCCACACGATATTACTTCTCCCG CGAACTCCCTATGAGCGCAA
Downstream 100 bases:
>100_bases TGAAGGTTGGCCGGAATAGCGGGCGCTCTGGCCTTCGACCCGGTATGGAACGTAGCTAGGTTCGTGTACTACTCCTTGCT CTCGCTCCAACACAGGGGAC
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 505; Mature: 505
Protein sequence:
>505_residues MVEVIKLSDRPSAFDKYPVVKDDVRNALKRGGVVAVGDPEGLTELAKEAKDSFWYRLFLCHDGCPEEVVETLAKLADHWE VHYSVSFQYPRGKVDRRGAIQKLVKEGLKARIVAVPENTFACASPSCRMCKSVCPSNAIRLKEGRVSIDPDKCTSCGLCV AACPLYSLDMPGLAPNELFAAVPPAKAGAAERVVWRTPDTLSPSDFKERTLVVLGIPLRVRIIVEYFTKVLGWEYCDDEG CVRPSKAEPRRCDHSLPEDVSPLVSIKMAYSLEDFYEVVVNPKLCDACTACSEACPTRSLVLRTPTPAMVILTHLPAACV GCHACVRACPVQKKLDALGLNIKMIRVVEGEGECVWKNLVVKRIFRPKCAVCDKFLDVDVDEYINAVERFVERVSRGEFE NVFDISSFLNKSEDLLKVLLCKECYSKYKQGVLPPQTVAKLVLLTVGCVYEQEGVRRGWADPVKALWHVASQLEVGGISY CSELNAYKALFGGVEFNLRGGPRQR
Sequences:
>Translated_505_residues MVEVIKLSDRPSAFDKYPVVKDDVRNALKRGGVVAVGDPEGLTELAKEAKDSFWYRLFLCHDGCPEEVVETLAKLADHWE VHYSVSFQYPRGKVDRRGAIQKLVKEGLKARIVAVPENTFACASPSCRMCKSVCPSNAIRLKEGRVSIDPDKCTSCGLCV AACPLYSLDMPGLAPNELFAAVPPAKAGAAERVVWRTPDTLSPSDFKERTLVVLGIPLRVRIIVEYFTKVLGWEYCDDEG CVRPSKAEPRRCDHSLPEDVSPLVSIKMAYSLEDFYEVVVNPKLCDACTACSEACPTRSLVLRTPTPAMVILTHLPAACV GCHACVRACPVQKKLDALGLNIKMIRVVEGEGECVWKNLVVKRIFRPKCAVCDKFLDVDVDEYINAVERFVERVSRGEFE NVFDISSFLNKSEDLLKVLLCKECYSKYKQGVLPPQTVAKLVLLTVGCVYEQEGVRRGWADPVKALWHVASQLEVGGISY CSELNAYKALFGGVEFNLRGGPRQR >Mature_505_residues MVEVIKLSDRPSAFDKYPVVKDDVRNALKRGGVVAVGDPEGLTELAKEAKDSFWYRLFLCHDGCPEEVVETLAKLADHWE VHYSVSFQYPRGKVDRRGAIQKLVKEGLKARIVAVPENTFACASPSCRMCKSVCPSNAIRLKEGRVSIDPDKCTSCGLCV AACPLYSLDMPGLAPNELFAAVPPAKAGAAERVVWRTPDTLSPSDFKERTLVVLGIPLRVRIIVEYFTKVLGWEYCDDEG CVRPSKAEPRRCDHSLPEDVSPLVSIKMAYSLEDFYEVVVNPKLCDACTACSEACPTRSLVLRTPTPAMVILTHLPAACV GCHACVRACPVQKKLDALGLNIKMIRVVEGEGECVWKNLVVKRIFRPKCAVCDKFLDVDVDEYINAVERFVERVSRGEFE NVFDISSFLNKSEDLLKVLLCKECYSKYKQGVLPPQTVAKLVLLTVGCVYEQEGVRRGWADPVKALWHVASQLEVGGISY CSELNAYKALFGGVEFNLRGGPRQR
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56006; Mature: 56006
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEVIKLSDRPSAFDKYPVVKDDVRNALKRGGVVAVGDPEGLTELAKEAKDSFWYRLFLC CEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHEEEEEEE HDGCPEEVVETLAKLADHWEVHYSVSFQYPRGKVDRRGAIQKLVKEGLKARIVAVPENTF CCCCHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCC ACASPSCRMCKSVCPSNAIRLKEGRVSIDPDKCTSCGLCVAACPLYSLDMPGLAPNELFA CCCCCCHHHHHHHCCCCCEEEECCCEEECHHHCCCCCHHHHHCCHHCCCCCCCCHHHHEE AVPPAKAGAAERVVWRTPDTLSPSDFKERTLVVLGIPLRVRIIVEYFTKVLGWEYCDDEG ECCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCC CVRPSKAEPRRCDHSLPEDVSPLVSIKMAYSLEDFYEVVVNPKLCDACTACSEACPTRSL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEE VLRTPTPAMVILTHLPAACVGCHACVRACPVQKKLDALGLNIKMIRVVEGEGECVWKNLV EEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEEECCCCHHHHHHH VKRIFRPKCAVCDKFLDVDVDEYINAVERFVERVSRGEFENVFDISSFLNKSEDLLKVLL HHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHH CKECYSKYKQGVLPPQTVAKLVLLTVGCVYEQEGVRRGWADPVKALWHVASQLEVGGISY HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHH CSELNAYKALFGGVEFNLRGGPRQR HHHHHHHHHHHCCEEEEECCCCCCC >Mature Secondary Structure MVEVIKLSDRPSAFDKYPVVKDDVRNALKRGGVVAVGDPEGLTELAKEAKDSFWYRLFLC CEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHEEEEEEE HDGCPEEVVETLAKLADHWEVHYSVSFQYPRGKVDRRGAIQKLVKEGLKARIVAVPENTF CCCCHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCC ACASPSCRMCKSVCPSNAIRLKEGRVSIDPDKCTSCGLCVAACPLYSLDMPGLAPNELFA CCCCCCHHHHHHHCCCCCEEEECCCEEECHHHCCCCCHHHHHCCHHCCCCCCCCHHHHEE AVPPAKAGAAERVVWRTPDTLSPSDFKERTLVVLGIPLRVRIIVEYFTKVLGWEYCDDEG ECCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCC CVRPSKAEPRRCDHSLPEDVSPLVSIKMAYSLEDFYEVVVNPKLCDACTACSEACPTRSL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEE VLRTPTPAMVILTHLPAACVGCHACVRACPVQKKLDALGLNIKMIRVVEGEGECVWKNLV EEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEEECCCCHHHHHHH VKRIFRPKCAVCDKFLDVDVDEYINAVERFVERVSRGEFENVFDISSFLNKSEDLLKVLL HHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHH CKECYSKYKQGVLPPQTVAKLVLLTVGCVYEQEGVRRGWADPVKALWHVASQLEVGGISY HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHH CSELNAYKALFGGVEFNLRGGPRQR HHHHHHHHHHHCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA