| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937252
Identifier: 156937252
GI number: 156937252
Start: 403984
End: 404709
Strand: Direct
Name: 156937252
Synonym: Igni_0458
Alternate gene names: NA
Gene position: 403984-404709 (Clockwise)
Preceding gene: 156937251
Following gene: 156937253
Centisome position: 31.13
GC content: 58.82
Gene sequence:
>726_bases ATGGAGTTGCTCGTAGGGGGGTGGAAGCCCTTCTCGCTGGTGGACGTCCAAGGAGCAATTACGTTCACAGTGTGGGCTTG CGGCTGTAACTTGAAGTGCCCGTTCTGCCACAACTGGAGGCAAGCGGAGTGGATGGACTGTGCCCCGTTCCTCGAGGAGA GGTTCTTGAACGACCTAATGGAGAGCAGAGAGTTCGTCGACTACGTCCACTTGACCGGCGGCGAGCCCACCTTACAGCCC GAGCTGGTGAAGAAGATATCTAGCTTGAGTAAGTCTAATGGCGTCCCATTCTCTCTCAACACCAACTGCACCACCAAGCA AGCCTTGGAACTGATACGCTTGGCCGACCACGTGGCGTTCGACGTGAAGGTACCCTTCCCCGCCCTCTCCGGCCTCGACG GGAAGGCCGGGGCCGTCTGGGAGACCTTCGAGAGGTGTACTGACGAGCTGGCCAAGAGCGGCAAGCCGGTCGAAATAAGG GTTCCGGTAGCCAAGGGCTTGACGAGTAAACACGTTGACGTCGTAAAAAGAATAGTTTACAAGTTTGACCCAGAGAAGGC GAGGGTGGTGGTCAACCCCTTGGTCGGTCCCCCGCTGACCGAGCCCCGCGACGAGGGGTGGTGCAAGGAGCACTGCTACC CCGGGAGGATGGACGAGGAGGAGGAGCGCTTCTGGGCCTCCCAGTTCCCCGAGTACAAGGTAAAGGTGAAGCGCTGGATA GAGTGA
Upstream 100 bases:
>100_bases CGCCGTTGCTCAAGCTCCTCCCCCTCCCGTGAAACTGTTATAACACGCCCACTGAGATATTGGGGGTTCGCGTCCTAATC TTCCCTCCGGGTACGAAGGT
Downstream 100 bases:
>100_bases GTTAGGAATTCCGAACTGAACTGTCGTCGAACGCCTCTCCGGGCCTTTTGAGGTCGGGGGCCTTAGGGCGTCGTAAGCCG AACATCCTGACTTTTTATGC
Product: anaerobic ribonucleoside-triphosphate reductase activating protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MELLVGGWKPFSLVDVQGAITFTVWACGCNLKCPFCHNWRQAEWMDCAPFLEERFLNDLMESREFVDYVHLTGGEPTLQP ELVKKISSLSKSNGVPFSLNTNCTTKQALELIRLADHVAFDVKVPFPALSGLDGKAGAVWETFERCTDELAKSGKPVEIR VPVAKGLTSKHVDVVKRIVYKFDPEKARVVVNPLVGPPLTEPRDEGWCKEHCYPGRMDEEEERFWASQFPEYKVKVKRWI E
Sequences:
>Translated_241_residues MELLVGGWKPFSLVDVQGAITFTVWACGCNLKCPFCHNWRQAEWMDCAPFLEERFLNDLMESREFVDYVHLTGGEPTLQP ELVKKISSLSKSNGVPFSLNTNCTTKQALELIRLADHVAFDVKVPFPALSGLDGKAGAVWETFERCTDELAKSGKPVEIR VPVAKGLTSKHVDVVKRIVYKFDPEKARVVVNPLVGPPLTEPRDEGWCKEHCYPGRMDEEEERFWASQFPEYKVKVKRWI E >Mature_241_residues MELLVGGWKPFSLVDVQGAITFTVWACGCNLKCPFCHNWRQAEWMDCAPFLEERFLNDLMESREFVDYVHLTGGEPTLQP ELVKKISSLSKSNGVPFSLNTNCTTKQALELIRLADHVAFDVKVPFPALSGLDGKAGAVWETFERCTDELAKSGKPVEIR VPVAKGLTSKHVDVVKRIVYKFDPEKARVVVNPLVGPPLTEPRDEGWCKEHCYPGRMDEEEERFWASQFPEYKVKVKRWI E
Specific function: Unknown
COG id: COG1180
COG function: function code O; Pyruvate-formate lyase-activating enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the organic radical-activating enzymes family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR012840 - InterPro: IPR001989 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 27418; Mature: 27418
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELLVGGWKPFSLVDVQGAITFTVWACGCNLKCPFCHNWRQAEWMDCAPFLEERFLNDLM CCEEECCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH ESREFVDYVHLTGGEPTLQPELVKKISSLSKSNGVPFSLNTNCTTKQALELIRLADHVAF HHHHHHHEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHEE DVKVPFPALSGLDGKAGAVWETFERCTDELAKSGKPVEIRVPVAKGLTSKHVDVVKRIVY EEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHCCCHHHHHHHHHHHH KFDPEKARVVVNPLVGPPLTEPRDEGWCKEHCYPGRMDEEEERFWASQFPEYKVKVKRWI HCCCCCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCEEHHHHHC E C >Mature Secondary Structure MELLVGGWKPFSLVDVQGAITFTVWACGCNLKCPFCHNWRQAEWMDCAPFLEERFLNDLM CCEEECCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH ESREFVDYVHLTGGEPTLQPELVKKISSLSKSNGVPFSLNTNCTTKQALELIRLADHVAF HHHHHHHEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHEE DVKVPFPALSGLDGKAGAVWETFERCTDELAKSGKPVEIRVPVAKGLTSKHVDVVKRIVY EEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHCCCHHHHHHHHHHHH KFDPEKARVVVNPLVGPPLTEPRDEGWCKEHCYPGRMDEEEERFWASQFPEYKVKVKRWI HCCCCCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCEEHHHHHC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]