| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937110
Identifier: 156937110
GI number: 156937110
Start: 272555
End: 274015
Strand: Direct
Name: 156937110
Synonym: Igni_0316
Alternate gene names: NA
Gene position: 272555-274015 (Clockwise)
Preceding gene: 156937105
Following gene: 156937115
Centisome position: 21.01
GC content: 60.78
Gene sequence:
>1461_bases ATGAGGCTAGGAGGCCCGGGGCGGCTGGACTTCAAGAAGTTTAAAGAAGAGAAGAGGGCCGGAACCGCGCTCTTGATCTT GGCCCTCGTCGGGAGCGCCGTCGCAGCCGGCTTGGTGTGGTACGAGTCGTACGTGAGTAACAACTACGTCTCTACGGAAG CTTACACGATATACAACGTCCCGGCCTTCGAGAAGCTCCTAAAGGAGAACAAGTACGTGGCGGTGATGTTTAGGAGCCTA ACTTGTCCGCACTGTGAGAAGATGTTGCCCTACTGGCTCAAGCTCGAGATGAGCCAAGGGAAAGTAAGGTTCGTCGACGT GGTTTACGGTACCAACACCGCCACCTTGTTCCAGAGGTACAAGGTAGAGGGGACGCCTACTTTCATACTCTTCAAGGACG GGAAGCCCGTGGCGAGACACGAGGGCGAGTTCATAGCGGAGAACGTGACGGAGGCGATGCTCAACTGGGCCCTCAGCGCC GTCGGCACCCCCGTCTTGGCGGGCTACCAGACCTACTTGGCCAAGTGCTCCGTGTGCCACGGCGCCCCGGCCTCGACCTC GAGGGAGGACTTGCTCGAGTGGGCCAAGAGCGAGAGGAACGGCATAGGGAGGCTCTTGTTAGAGGCCTACCGGAAGAGGG TGACCCTCGAGGAGCTCTTGGGGAGCGAGGACGCCATTAAGGAGAGGATATGGGGCATGGCGAGGAGGAACAACGTCCCC CTGGACCAGAAGACCGTGGACGAGACCGCCAAGTTCTTGCAAGCGGTCAGCGAGGTGTTGATAGGGAAGAAAGAGGTAAA CGCAGCGTCGATGTCCGCGGGGACTACTGAAATACCGTCTAGCGGCTCGGCCGCGCCGGCGCTGATGTTCTTGGTCGGCC TGGCCGCCGGGGTCGGGGCGGCCGTCTCCCCTTGTAACTTCCCGCTGTTCGTGACTTACGTGACTAGGGGCTTGAGGGAG AGGAGGTCCTCCGCCCTCTCGGCCGTAAGCTGCGCGGCGGCCGCTGCCGTGGGTGTGGCCTTCCTCGGGGCACTGTTCTT GGCCTTCTCCACCGCCGCCTTGGAGCTGCAGAAGTTCTTGATACCCGTTGTAGGGACCGTAATAGTCGCTATAAGCGCGG CGAGCTTGCTGAAGGTGCCTATAAGCTTCAGCGCAGGCTCGCTGGGCAAGACCGGAGGGAAGGCGTTCTGCTTCATTTAC GGCTTCTTGTCGGTACAGTGCAACTTGCCCTTGGTCATAGGGGCGTTGTTGCTCATAGCCAGCGGCGGGGGCTTCCAGAC GCTGGCGGGCTTCGCCTTAGGCGTTGCGGCCCCGCTCTTCGCGGTCAGCTGGGCCGGGCCGAGGGTCAGGGGGCTGGCGG AGAAGATAGTGAGGAACAGCGAGAGGATAGAGCTGATAACCAACGCCTTCATGCTCGCAGCCGGAATATACTTGCTGTTC TACGGCGCGACCCTCATGTAG
Upstream 100 bases:
>100_bases GGAGGTGATAAGCTATTTCCGCCTCCGTAAGGAGTTCGAGGGGAGAGCGTCCACATCATAACCCCTAGTTCCGAACCCTT GGGGGCTTGGAAGCTTGAGC
Downstream 100 bases:
>100_bases AACGAAGCCGGCGTAAACGCCCTCGCGACCTTGTAGACCTTTTTGACCTCCTCCAAGACCTCGTCTGCGTAAGCTCCCTC CACGAAGAGTACGCCCGCGG
Product: thioredoxin domain-containing protein
Products: NA
Alternate protein names: Thioredoxin Domain-Containing Protein; Cytochrome C Biogenesis Protein
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MRLGGPGRLDFKKFKEEKRAGTALLILALVGSAVAAGLVWYESYVSNNYVSTEAYTIYNVPAFEKLLKENKYVAVMFRSL TCPHCEKMLPYWLKLEMSQGKVRFVDVVYGTNTATLFQRYKVEGTPTFILFKDGKPVARHEGEFIAENVTEAMLNWALSA VGTPVLAGYQTYLAKCSVCHGAPASTSREDLLEWAKSERNGIGRLLLEAYRKRVTLEELLGSEDAIKERIWGMARRNNVP LDQKTVDETAKFLQAVSEVLIGKKEVNAASMSAGTTEIPSSGSAAPALMFLVGLAAGVGAAVSPCNFPLFVTYVTRGLRE RRSSALSAVSCAAAAAVGVAFLGALFLAFSTAALELQKFLIPVVGTVIVAISAASLLKVPISFSAGSLGKTGGKAFCFIY GFLSVQCNLPLVIGALLLIASGGGFQTLAGFALGVAAPLFAVSWAGPRVRGLAEKIVRNSERIELITNAFMLAAGIYLLF YGATLM
Sequences:
>Translated_486_residues MRLGGPGRLDFKKFKEEKRAGTALLILALVGSAVAAGLVWYESYVSNNYVSTEAYTIYNVPAFEKLLKENKYVAVMFRSL TCPHCEKMLPYWLKLEMSQGKVRFVDVVYGTNTATLFQRYKVEGTPTFILFKDGKPVARHEGEFIAENVTEAMLNWALSA VGTPVLAGYQTYLAKCSVCHGAPASTSREDLLEWAKSERNGIGRLLLEAYRKRVTLEELLGSEDAIKERIWGMARRNNVP LDQKTVDETAKFLQAVSEVLIGKKEVNAASMSAGTTEIPSSGSAAPALMFLVGLAAGVGAAVSPCNFPLFVTYVTRGLRE RRSSALSAVSCAAAAAVGVAFLGALFLAFSTAALELQKFLIPVVGTVIVAISAASLLKVPISFSAGSLGKTGGKAFCFIY GFLSVQCNLPLVIGALLLIASGGGFQTLAGFALGVAAPLFAVSWAGPRVRGLAEKIVRNSERIELITNAFMLAAGIYLLF YGATLM >Mature_486_residues MRLGGPGRLDFKKFKEEKRAGTALLILALVGSAVAAGLVWYESYVSNNYVSTEAYTIYNVPAFEKLLKENKYVAVMFRSL TCPHCEKMLPYWLKLEMSQGKVRFVDVVYGTNTATLFQRYKVEGTPTFILFKDGKPVARHEGEFIAENVTEAMLNWALSA VGTPVLAGYQTYLAKCSVCHGAPASTSREDLLEWAKSERNGIGRLLLEAYRKRVTLEELLGSEDAIKERIWGMARRNNVP LDQKTVDETAKFLQAVSEVLIGKKEVNAASMSAGTTEIPSSGSAAPALMFLVGLAAGVGAAVSPCNFPLFVTYVTRGLRE RRSSALSAVSCAAAAAVGVAFLGALFLAFSTAALELQKFLIPVVGTVIVAISAASLLKVPISFSAGSLGKTGGKAFCFIY GFLSVQCNLPLVIGALLLIASGGGFQTLAGFALGVAAPLFAVSWAGPRVRGLAEKIVRNSERIELITNAFMLAAGIYLLF YGATLM
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52101; Mature: 52101
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLGGPGRLDFKKFKEEKRAGTALLILALVGSAVAAGLVWYESYVSNNYVSTEAYTIYNV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECC PAFEKLLKENKYVAVMFRSLTCPHCEKMLPYWLKLEMSQGKVRFVDVVYGTNTATLFQRY HHHHHHHHCCCEEEEEEHHCCCCCHHHHCCHHEEEEECCCCEEEEEEEECCCHHHHHHHH KVEGTPTFILFKDGKPVARHEGEFIAENVTEAMLNWALSAVGTPVLAGYQTYLAKCSVCH EECCCCEEEEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC GAPASTSREDLLEWAKSERNGIGRLLLEAYRKRVTLEELLGSEDAIKERIWGMARRNNVP CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHCCCCC LDQKTVDETAKFLQAVSEVLIGKKEVNAASMSAGTTEIPSSGSAAPALMFLVGLAAGVGA CCHHHHHHHHHHHHHHHHHHHCHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC AVSPCNFPLFVTYVTRGLRERRSSALSAVSCAAAAAVGVAFLGALFLAFSTAALELQKFL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPVVGTVIVAISAASLLKVPISFSAGSLGKTGGKAFCFIYGFLSVQCNLPLVIGALLLIA HHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEEEEEEHHHCCCCHHHHHHHHHHC SGGGFQTLAGFALGVAAPLFAVSWAGPRVRGLAEKIVRNSERIELITNAFMLAAGIYLLF CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH YGATLM HHHHCC >Mature Secondary Structure MRLGGPGRLDFKKFKEEKRAGTALLILALVGSAVAAGLVWYESYVSNNYVSTEAYTIYNV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECC PAFEKLLKENKYVAVMFRSLTCPHCEKMLPYWLKLEMSQGKVRFVDVVYGTNTATLFQRY HHHHHHHHCCCEEEEEEHHCCCCCHHHHCCHHEEEEECCCCEEEEEEEECCCHHHHHHHH KVEGTPTFILFKDGKPVARHEGEFIAENVTEAMLNWALSAVGTPVLAGYQTYLAKCSVCH EECCCCEEEEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC GAPASTSREDLLEWAKSERNGIGRLLLEAYRKRVTLEELLGSEDAIKERIWGMARRNNVP CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHCCCCC LDQKTVDETAKFLQAVSEVLIGKKEVNAASMSAGTTEIPSSGSAAPALMFLVGLAAGVGA CCHHHHHHHHHHHHHHHHHHHCHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC AVSPCNFPLFVTYVTRGLRERRSSALSAVSCAAAAAVGVAFLGALFLAFSTAALELQKFL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPVVGTVIVAISAASLLKVPISFSAGSLGKTGGKAFCFIYGFLSVQCNLPLVIGALLLIA HHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEEEEEEHHHCCCCHHHHHHHHHHC SGGGFQTLAGFALGVAAPLFAVSWAGPRVRGLAEKIVRNSERIELITNAFMLAAGIYLLF CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH YGATLM HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA