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The map label for this gene is rpl31e

Identifier: 156937081

GI number: 156937081

Start: 244673

End: 244978

Strand: Direct

Name: rpl31e

Synonym: Igni_0287

Alternate gene names: 156937081

Gene position: 244673-244978 (Clockwise)

Preceding gene: 156937080

Following gene: 156937082

Centisome position: 18.86

GC content: 57.19

Gene sequence:

>306_bases
GTGCCCAAGGAAAAGGACGGCGTAATTTATACAATAAACTTGAGGAGGCTCTACTGGGGAAGGAGGAGCAACAGGGCCAA
GAGGGCCGTGAGGATGGTTAGGGAGTTCGTGGCCAGACACTTCGGAGTGGAGCCGGAGGACGTGAAGATAGACAACACCG
TGAACAACTACTTGTGGAGCGGGAGCATCACCAAGCCCCCGGCCAGGGTGCAAGTGTACGTCACCGTCAAGACCGAGTCC
GGCGAGGAAGGCGAGAGGAAGGTAGCCTACGTCACCCTCGCTAACGTAAAGGACGTGGAGGACTGA

Upstream 100 bases:

>100_bases
CCCGCGTGGGTTATATTAAAGACCCGCAGGAGGGTTACCCGGAACCCCATGAGGAGGTATTGGAGGAGGCAAAAGATAAA
GAACGTCTGAGGTGATGGGC

Downstream 100 bases:

>100_bases
AGCGACATGAACTTCGACGTAGTCCCCATATCCATTTTTGGGAACCCGAATATTGGCGTGTACATGTTCGCCAACGACGA
CTTCGCCCTAATTCCGCCCG

Product: 50S ribosomal protein L31e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MPKEKDGVIYTINLRRLYWGRRSNRAKRAVRMVREFVARHFGVEPEDVKIDNTVNNYLWSGSITKPPARVQVYVTVKTES
GEEGERKVAYVTLANVKDVED

Sequences:

>Translated_101_residues
MPKEKDGVIYTINLRRLYWGRRSNRAKRAVRMVREFVARHFGVEPEDVKIDNTVNNYLWSGSITKPPARVQVYVTVKTES
GEEGERKVAYVTLANVKDVED
>Mature_100_residues
PKEKDGVIYTINLRRLYWGRRSNRAKRAVRMVREFVARHFGVEPEDVKIDNTVNNYLWSGSITKPPARVQVYVTVKTESG
EEGERKVAYVTLANVKDVED

Specific function: Unknown

COG id: COG2097

COG function: function code J; Ribosomal protein L31E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL31_IGNH4 (A8A968)

Other databases:

- EMBL:   CP000816
- RefSeq:   YP_001434877.1
- ProteinModelPortal:   A8A968
- SMR:   A8A968
- STRING:   A8A968
- GeneID:   5561925
- GenomeReviews:   CP000816_GR
- KEGG:   iho:Igni_0287
- eggNOG:   arNOG12640
- HOGENOM:   HBG553310
- OMA:   RAKYAVG
- ProtClustDB:   PRK01192
- BioCyc:   IHOS453591:IGNI_0287-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00410
- InterPro:   IPR000054
- Gene3D:   G3DSA:3.10.440.10
- PANTHER:   PTHR10956
- ProDom:   PD006030

Pfam domain/function: PF01198 Ribosomal_L31e; SSF54575 Ribosomal_L31e

EC number: NA

Molecular weight: Translated: 11698; Mature: 11567

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS01144 RIBOSOMAL_L31E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKEKDGVIYTINLRRLYWGRRSNRAKRAVRMVREFVARHFGVEPEDVKIDNTVNNYLWS
CCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEC
GSITKPPARVQVYVTVKTESGEEGERKVAYVTLANVKDVED
CCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCC
>Mature Secondary Structure 
PKEKDGVIYTINLRRLYWGRRSNRAKRAVRMVREFVARHFGVEPEDVKIDNTVNNYLWS
CCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEC
GSITKPPARVQVYVTVKTESGEEGERKVAYVTLANVKDVED
CCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA