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The map label for this gene is nusA [H]

Identifier: 156937041

GI number: 156937041

Start: 214343

End: 214774

Strand: Direct

Name: nusA [H]

Synonym: Igni_0246

Alternate gene names: 156937041

Gene position: 214343-214774 (Clockwise)

Preceding gene: 156937040

Following gene: 156937042

Centisome position: 16.52

GC content: 52.55

Gene sequence:

>432_bases
ATGCCGGATATAGTCCTCACCCCGGAAGAGTTTAGGTACATGCAGACCTTCGCTACGCTGACCGGAGTGACGCCCGTCGA
CTGCATAGTGGACCCGACCTTTGATAGAATAATCTTCCTAGTGAAGCCGGAGGACGTGGGAAGGGCGATAGGCAAGAGGG
GCTTTATGGTTAGAAAGTTGAAGGAAATATTGAAGAAGCAGATAGAGATAGTCCCCTACAGCGACAACATTGAAGAGATG
GTAAAGAACGCCTTGGCCCCGGCTAGGGTGATTGGAGTCAGGGTGAGCAAGACTCCAAAGGGGAAGGTCGTGTACGCCAG
AGTGAACCCCAAGGATAAGGGAGTGGCCATAGGTAAGGAGGGCCGAAACGTCGCCAAGGCCCGTTTAATCCTTAAAAGAC
ACTTCGATGTGGACTCGCTCGTGGTGGTCTGA

Upstream 100 bases:

>100_bases
CTGTGCGCCAAGCCCTTCGTCGTGAGCGCCCTCGCGGTAGTAGACGAGGGCGACTCTAAAATAGTGGACGCAATAAAAGC
CGAGAGCAGGGTTGAGTGAA

Downstream 100 bases:

>100_bases
GGGGGTGAGGTGCGATGCCCGGTAAGAAAGCTCCCAACGGACTGTTCGCGGCTAGGAAGCTGGAGAGGAAGAGGCTCAAG
TTCAGGTGGAGCCAGAGGGA

Product: NusA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MPDIVLTPEEFRYMQTFATLTGVTPVDCIVDPTFDRIIFLVKPEDVGRAIGKRGFMVRKLKEILKKQIEIVPYSDNIEEM
VKNALAPARVIGVRVSKTPKGKVVYARVNPKDKGVAIGKEGRNVAKARLILKRHFDVDSLVVV

Sequences:

>Translated_143_residues
MPDIVLTPEEFRYMQTFATLTGVTPVDCIVDPTFDRIIFLVKPEDVGRAIGKRGFMVRKLKEILKKQIEIVPYSDNIEEM
VKNALAPARVIGVRVSKTPKGKVVYARVNPKDKGVAIGKEGRNVAKARLILKRHFDVDSLVVV
>Mature_142_residues
PDIVLTPEEFRYMQTFATLTGVTPVDCIVDPTFDRIIFLVKPEDVGRAIGKRGFMVRKLKEILKKQIEIVPYSDNIEEMV
KNALAPARVIGVRVSKTPKGKVVYARVNPKDKGVAIGKEGRNVAKARLILKRHFDVDSLVVV

Specific function: Unknown

COG id: COG0195

COG function: function code K; Transcription elongation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004087
- InterPro:   IPR015946
- InterPro:   IPR009019
- InterPro:   IPR004088
- InterPro:   IPR004044
- InterPro:   IPR010212 [H]

Pfam domain/function: PF07650 KH_2 [H]

EC number: NA

Molecular weight: Translated: 16032; Mature: 15901

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDIVLTPEEFRYMQTFATLTGVTPVDCIVDPTFDRIIFLVKPEDVGRAIGKRGFMVRKL
CCCCEECHHHHHHHHHHHHHCCCCCCCEEECCCCHHEEEEECCHHHHHHHHHCCHHHHHH
KEILKKQIEIVPYSDNIEEMVKNALAPARVIGVRVSKTPKGKVVYARVNPKDKGVAIGKE
HHHHHHHHEEECCCCCHHHHHHHHCCCHHEEEEEECCCCCCCEEEEEECCCCCCEEECCC
GRNVAKARLILKRHFDVDSLVVV
CCHHHHHHHHHHHCCCCCEEEEC
>Mature Secondary Structure 
PDIVLTPEEFRYMQTFATLTGVTPVDCIVDPTFDRIIFLVKPEDVGRAIGKRGFMVRKL
CCCEECHHHHHHHHHHHHHCCCCCCCEEECCCCHHEEEEECCHHHHHHHHHCCHHHHHH
KEILKKQIEIVPYSDNIEEMVKNALAPARVIGVRVSKTPKGKVVYARVNPKDKGVAIGKE
HHHHHHHHEEECCCCCHHHHHHHHCCCHHEEEEEECCCCCCCEEEEEECCCCCCEEECCC
GRNVAKARLILKRHFDVDSLVVV
CCHHHHHHHHHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2501756 [H]