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The map label for this gene is rpl18e [H]

Identifier: 156936979

GI number: 156936979

Start: 162277

End: 162633

Strand: Direct

Name: rpl18e [H]

Synonym: Igni_0184

Alternate gene names: 156936979

Gene position: 162277-162633 (Clockwise)

Preceding gene: 156936978

Following gene: 156936980

Centisome position: 12.51

GC content: 55.46

Gene sequence:

>357_bases
GTGCCCGCGAGGAGGAGGAAGATTACAAACGTTTTGTTAAGGAAGACGCTGGACGAGCTCTGGAAGACCAAGTCTCCCGC
GTGGAGGAGGGTCTACGAGCTGCTGAACAGGCCGGCGCGCCAGAGGATAGTGGTGAACGTGAGCAAGATAAATAGGTACG
CCAATGACGGCGACGTCGTAGTGGTCCCCGGCAAGGTCTTGGGCTCCGGTGAGTTAGAGAAGAAGGTAACCGTGGCGGCT
TTTTCGTTCTCCTATACCGCGTTAGAGAAGATAGAGACGGCGGGTGGCAAGGCGCTCCACATCTTGGAGCTAGTGAAGGA
GAACCCCAAGGGTAGCGGCATTAAGATTATTACGTGA

Upstream 100 bases:

>100_bases
TTGAGCGCGAGGAGGACTTTGGTTGAAGCGGCTAAGGCGGTGGTCGAGAAGCTGAGCGAATTAAAGAACCGCCTACAGTC
TCGCGAGGGGTGAGCGAGCG

Downstream 100 bases:

>100_bases
GGTGGTGGTCATGAAGAGAGTGGTCGTGATCGATGCTACGAATCAAATAGTAGGTCGGATGGCCTCCCACATCGCTAAGA
TGTTGCTCGAGGGGTGGGAG

Product: 50S ribosomal protein L18AE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MPARRRKITNVLLRKTLDELWKTKSPAWRRVYELLNRPARQRIVVNVSKINRYANDGDVVVVPGKVLGSGELEKKVTVAA
FSFSYTALEKIETAGGKALHILELVKENPKGSGIKIIT

Sequences:

>Translated_118_residues
MPARRRKITNVLLRKTLDELWKTKSPAWRRVYELLNRPARQRIVVNVSKINRYANDGDVVVVPGKVLGSGELEKKVTVAA
FSFSYTALEKIETAGGKALHILELVKENPKGSGIKIIT
>Mature_117_residues
PARRRKITNVLLRKTLDELWKTKSPAWRRVYELLNRPARQRIVVNVSKINRYANDGDVVVVPGKVLGSGELEKKVTVAAF
SFSYTALEKIETAGGKALHILELVKENPKGSGIKIIT

Specific function: Unknown

COG id: COG1727

COG function: function code J; Ribosomal protein L18E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L18e family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001196
- InterPro:   IPR021131
- InterPro:   IPR022947 [H]

Pfam domain/function: PF00828 Ribosomal_L18e [H]

EC number: NA

Molecular weight: Translated: 13226; Mature: 13095

Theoretical pI: Translated: 11.01; Mature: 11.01

Prosite motif: PS00475 RIBOSOMAL_L15

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPARRRKITNVLLRKTLDELWKTKSPAWRRVYELLNRPARQRIVVNVSKINRYANDGDVV
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHEEEEHHHHHCCCCCCCEE
VVPGKVLGSGELEKKVTVAAFSFSYTALEKIETAGGKALHILELVKENPKGSGIKIIT
EECCCEECCCCCCCEEEEEEEECHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEC
>Mature Secondary Structure 
PARRRKITNVLLRKTLDELWKTKSPAWRRVYELLNRPARQRIVVNVSKINRYANDGDVV
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHEEEEHHHHHCCCCCCCEE
VVPGKVLGSGELEKKVTVAAFSFSYTALEKIETAGGKALHILELVKENPKGSGIKIIT
EECCCEECCCCCCCEEEEEEEECHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA