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The map label for this gene is ptr2 [H]

Identifier: 156936917

GI number: 156936917

Start: 109953

End: 110501

Strand: Direct

Name: ptr2 [H]

Synonym: Igni_0122

Alternate gene names: 156936917

Gene position: 109953-110501 (Clockwise)

Preceding gene: 156936899

Following gene: 156936918

Centisome position: 8.47

GC content: 51.73

Gene sequence:

>549_bases
ATGGCTGCCAGAAGGGTCCGGAACCTGGGCGAGCCGAGCATAATAGACTTCGTCCGCTCCGAGAGGATAAACGATAGGGA
CAAGTTAATCCTCAAGACATTATTAAAGAATTCGAAGACGACTACGACCGATATAGCTGAAAAGCTCAACATAAGCGACG
TGGCTACTAGGAGGAGGATCAAGAAGCTCGAGGAAGAGGGCGTGATAAGGTTCTACACGGCAATATTAAACCCTAAGAAG
CTCGGCTTCAACGTCGTCGCCCTCTTGTTAATAGAAACAGAACCTTCGAGCGTAGACGAGGTCGCGAAGACTCTAGCCGA
GATACCGCACGTGGTGGAGCTGGGCACGCTCTTGGGAGACGCGAGCGTTTACGCGGTGGTCTGGGCGGAGGACTTGGAGA
GCTTAGAGAACATCGTAAAGGAGAAGATAGGCAAGGTGAAACAGATAAAGAAGATACATACGTACTTAATGGCCAAACAT
TACAAGGTCAACGGACTGCCCCTTCGGGAGAGCGAGCTTGTGCCGGATGATGGCGGGCACGAGGCCTAG

Upstream 100 bases:

>100_bases
AAATAGCGTCGGACCAAGTTTACCTTCCCTATTGTAGGGAAACGGAGCCTGCGGAAGCTTCATTAGCGAGTAATGTTAAC
CCCCTTAATGGGGTTCTGTG

Downstream 100 bases:

>100_bases
GTTCATTACTAACTTTGTAAAGGTGGCTCGCAAGGACGGCAAAGGTCTGCCTAACGGCGACGGTTGGGGCTTTGCAGCCT
ATTTAGCGGACGGCACTATC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MAARRVRNLGEPSIIDFVRSERINDRDKLILKTLLKNSKTTTTDIAEKLNISDVATRRRIKKLEEEGVIRFYTAILNPKK
LGFNVVALLLIETEPSSVDEVAKTLAEIPHVVELGTLLGDASVYAVVWAEDLESLENIVKEKIGKVKQIKKIHTYLMAKH
YKVNGLPLRESELVPDDGGHEA

Sequences:

>Translated_182_residues
MAARRVRNLGEPSIIDFVRSERINDRDKLILKTLLKNSKTTTTDIAEKLNISDVATRRRIKKLEEEGVIRFYTAILNPKK
LGFNVVALLLIETEPSSVDEVAKTLAEIPHVVELGTLLGDASVYAVVWAEDLESLENIVKEKIGKVKQIKKIHTYLMAKH
YKVNGLPLRESELVPDDGGHEA
>Mature_181_residues
AARRVRNLGEPSIIDFVRSERINDRDKLILKTLLKNSKTTTTDIAEKLNISDVATRRRIKKLEEEGVIRFYTAILNPKKL
GFNVVALLLIETEPSSVDEVAKTLAEIPHVVELGTLLGDASVYAVVWAEDLESLENIVKEKIGKVKQIKKIHTYLMAKHY
KVNGLPLRESELVPDDGGHEA

Specific function: Participates in positive as well as negative regulation of transcription. Binds to its own promoter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR013196
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 20439; Mature: 20308

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARRVRNLGEPSIIDFVRSERINDRDKLILKTLLKNSKTTTTDIAEKLNISDVATRRRI
CCCHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHH
KKLEEEGVIRFYTAILNPKKLGFNVVALLLIETEPSSVDEVAKTLAEIPHVVELGTLLGD
HHHHHCCHHHHHHHHHCCHHCCHHEEEEEEECCCCCCHHHHHHHHHHCHHHHHHHHHHCC
ASVYAVVWAEDLESLENIVKEKIGKVKQIKKIHTYLMAKHYKVNGLPLRESELVPDDGGH
CHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
EA
CC
>Mature Secondary Structure 
AARRVRNLGEPSIIDFVRSERINDRDKLILKTLLKNSKTTTTDIAEKLNISDVATRRRI
CCHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHH
KKLEEEGVIRFYTAILNPKKLGFNVVALLLIETEPSSVDEVAKTLAEIPHVVELGTLLGD
HHHHHCCHHHHHHHHHCCHHCCHHEEEEEEECCCCCCHHHHHHHHHHCHHHHHHHHHHCC
ASVYAVVWAEDLESLENIVKEKIGKVKQIKKIHTYLMAKHYKVNGLPLRESELVPDDGGH
CHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
EA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 11226165 [H]