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The map label for this gene is 156936904

Identifier: 156936904

GI number: 156936904

Start: 101770

End: 102357

Strand: Reverse

Name: 156936904

Synonym: Igni_0109

Alternate gene names: NA

Gene position: 102357-101770 (Counterclockwise)

Preceding gene: 156936905

Following gene: 156936903

Centisome position: 7.89

GC content: 57.14

Gene sequence:

>588_bases
ATGTACGTTTGGTTCCCTTCGAACCCTAAGTACATAAAGTTTATGTACGGGGCACCGGCACTCTTGATCTCATGGGCCGT
GTTGACTATAGCTTTCGGAATAAGGTACTTGCTGTTCGGCTTCTGGCAGCTGTTGGCGTGGGTCGCCCTGGCGGTCGCGA
CGGGCTTCATCTTCCACGAACTGGCGCACAGGGAAACGGCCAAGAGGATGGGCTGTCGGGCGGAGTACGTGCTGTGGCCT
ACGGGGCTCGCGATAGCCCTGTTCTTGGCTCTAATAAGCAAAGGCTCTTTCGTCTTCGCCGCCCCGGGGGCCGTAACGTT
CGCTTGCGCCTACCGCAACAAGAGGGCCGAGGGCTTGATAGCCGCTGCAGGCCCCCTCGCCAACATTGCGGTGGCGCTGG
TATCACAAGCACTGTTCTACCTCACCGGCGCTTGGGGCCTGCTGATAGTTTCCAACGTTAACTGGTTCTTAGCGCTGTTC
AACTTGTTGCCCTTGGACCCGTTGGACGGTGCAAAGGTCATGAGGTATAACTTAGCGCTGTGGCTGGCGCTGTTCTCCGT
CTCTGTGGTTTTCACTTTCGTGCTCTAA

Upstream 100 bases:

>100_bases
CTGAAGGGATGGTACTGATGGCCCAAGAGGACGAGGGGAGCAAGCCCGTGTTCGTGGTCCCCCAAGAGCCCGTAAGGCCC
GGAACGAAGGTGTTCTGAGC

Downstream 100 bases:

>100_bases
CGTATGGATTAGCTTATAGAAAAGCTTTATTTTGCCCAACCGTAGGGTCCCCCGAAGGTTTATGATAAAGGAAAGGACGC
TGAAGGTGGTAGCAGCCCTA

Product: peptidase M50

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MYVWFPSNPKYIKFMYGAPALLISWAVLTIAFGIRYLLFGFWQLLAWVALAVATGFIFHELAHRETAKRMGCRAEYVLWP
TGLAIALFLALISKGSFVFAAPGAVTFACAYRNKRAEGLIAAAGPLANIAVALVSQALFYLTGAWGLLIVSNVNWFLALF
NLLPLDPLDGAKVMRYNLALWLALFSVSVVFTFVL

Sequences:

>Translated_195_residues
MYVWFPSNPKYIKFMYGAPALLISWAVLTIAFGIRYLLFGFWQLLAWVALAVATGFIFHELAHRETAKRMGCRAEYVLWP
TGLAIALFLALISKGSFVFAAPGAVTFACAYRNKRAEGLIAAAGPLANIAVALVSQALFYLTGAWGLLIVSNVNWFLALF
NLLPLDPLDGAKVMRYNLALWLALFSVSVVFTFVL
>Mature_195_residues
MYVWFPSNPKYIKFMYGAPALLISWAVLTIAFGIRYLLFGFWQLLAWVALAVATGFIFHELAHRETAKRMGCRAEYVLWP
TGLAIALFLALISKGSFVFAAPGAVTFACAYRNKRAEGLIAAAGPLANIAVALVSQALFYLTGAWGLLIVSNVNWFLALF
NLLPLDPLDGAKVMRYNLALWLALFSVSVVFTFVL

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 21521; Mature: 21521

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVWFPSNPKYIKFMYGAPALLISWAVLTIAFGIRYLLFGFWQLLAWVALAVATGFIFHE
CEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAHRETAKRMGCRAEYVLWPTGLAIALFLALISKGSFVFAAPGAVTFACAYRNKRAEGLI
HHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCEEEECCCHHEEHHHHCCCCCCCEE
AAAGPLANIAVALVSQALFYLTGAWGLLIVSNVNWFLALFNLLPLDPLDGAKVMRYNLAL
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHH
WLALFSVSVVFTFVL
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MYVWFPSNPKYIKFMYGAPALLISWAVLTIAFGIRYLLFGFWQLLAWVALAVATGFIFHE
CEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAHRETAKRMGCRAEYVLWPTGLAIALFLALISKGSFVFAAPGAVTFACAYRNKRAEGLI
HHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCEEEECCCHHEEHHHHCCCCCCCEE
AAAGPLANIAVALVSQALFYLTGAWGLLIVSNVNWFLALFNLLPLDPLDGAKVMRYNLAL
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHH
WLALFSVSVVFTFVL
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]