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The map label for this gene is rps27e [H]

Identifier: 156936898

GI number: 156936898

Start: 96488

End: 96697

Strand: Direct

Name: rps27e [H]

Synonym: Igni_0103

Alternate gene names: 156936898

Gene position: 96488-96697 (Clockwise)

Preceding gene: 156936893

Following gene: 156936899

Centisome position: 7.44

GC content: 58.1

Gene sequence:

>210_bases
GTGCCGCGTAAGAGGAAGCTCTACAAGATACTGACGCCGGAGCCCAGGTCCAAGTTCTTGAAGGTTAGGTGTCCCACGTG
TCACAACGAACAGATAGTGTTCAGCCACGCGACCTACCCGGCCACCTGCCTCATGTGCGGGACCCCCTTGGTCAGGCCCA
GGGGAGGGAAGGCTGAAATACTGGGAGAGATCGTCAGGATACTCGACTGA

Upstream 100 bases:

>100_bases
CAAGAGTTGGAGAGGAGCTCGTATAACATTTCCCGTCGGTCAGCCGTCCGCTCAAACCATTATAACTGTAAGCCGGAACT
CCGGCCCCGGGGACGAGAGG

Downstream 100 bases:

>100_bases
ACGCGTTTTTTGTTTACCGCTTGCATAGCCCTACCCTAATATTTAATACCCAATGGTCTGTGTGGACTAAAGGTCCCACG
CCATGACTATCTACAAAGAC

Product: SSU ribosomal protein S27E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 69; Mature: 68

Protein sequence:

>69_residues
MPRKRKLYKILTPEPRSKFLKVRCPTCHNEQIVFSHATYPATCLMCGTPLVRPRGGKAEILGEIVRILD

Sequences:

>Translated_69_residues
MPRKRKLYKILTPEPRSKFLKVRCPTCHNEQIVFSHATYPATCLMCGTPLVRPRGGKAEILGEIVRILD
>Mature_68_residues
PRKRKLYKILTPEPRSKFLKVRCPTCHNEQIVFSHATYPATCLMCGTPLVRPRGGKAEILGEIVRILD

Specific function: Unknown

COG id: COG2051

COG function: function code J; Ribosomal protein S27E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S27e family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000592
- InterPro:   IPR022959
- InterPro:   IPR011332 [H]

Pfam domain/function: PF01667 Ribosomal_S27e [H]

EC number: NA

Molecular weight: Translated: 7880; Mature: 7748

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: PS01168 RIBOSOMAL_S27E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
5.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRKRKLYKILTPEPRSKFLKVRCPTCHNEQIVFSHATYPATCLMCGTPLVRPRGGKAEI
CCCCCCEEEECCCCCCCCEEEEECCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCHHH
LGEIVRILD
HHHHHHHCC
>Mature Secondary Structure 
PRKRKLYKILTPEPRSKFLKVRCPTCHNEQIVFSHATYPATCLMCGTPLVRPRGGKAEI
CCCCCEEEECCCCCCCCEEEEECCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCHHH
LGEIVRILD
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA