Click here to switch to the map view.

The map label for this gene is 156936877

Identifier: 156936877

GI number: 156936877

Start: 80811

End: 81365

Strand: Reverse

Name: 156936877

Synonym: Igni_0082

Alternate gene names: NA

Gene position: 81365-80811 (Counterclockwise)

Preceding gene: 156936878

Following gene: 156936875

Centisome position: 6.27

GC content: 56.4

Gene sequence:

>555_bases
TTGCGAACGCTCTTGGCGTCCCCCAGAGGGGCGTTAGTGAAGGACGACCGCCTCCTACCGTTTCTCTTAAGAGGAAAGAC
GTTGGTAACTGTAGGAGACGTGACTACCAAAAGGTGCTTAGAACTAGGCTTAGTGCCTAGAACGGCGATCTTCGACGGCA
AGACGAGGAGGTCGCAGTGGGTGGAGCTGAGGGCCCCCAACGGGGTGCTGAAGGCCTTCAACCCTCCCGGGCAGATCTGC
TTGGACGCGGCCAAGGTAGTGAAGAAGGCCATCCTAACCTCAACTTGGGTAAAGGTAGAGGGGGAGGAAGACCTCCTCGC
CATCCCGGCCCTCTTGAGCTCGGAGAACGGGTGGGCGCTGCTGTACGGCCAACCCAAAGCGGGGGTCGTATTGGTTGAAA
TCAACAAATACACCAAGCTCCATTTTCTCGAAATAATTAAGATGTTCGACGGCGACGTGGAGGAGTTCCTAAGAGAGTTC
GACTACGACCCTAACCAACCCCTTCTCGGCGAGCTGGACGAGCGCCTTTACGACCTCCTCTTCCCCGAGCTTTAA

Upstream 100 bases:

>100_bases
TGATCAAGACGGACTCGGAACTCGTGGGCAAGGTAGAGTACCTCAAGGAGCCGGGGCGCTACGCTGTAGAAGTGGGAAGG
GAGTAAGGCTGCCCCAGAGC

Downstream 100 bases:

>100_bases
TTTCTTACACTCCTCTATTAACTTTACCAAGTCCAGCTTACCCTTCTCTAAGACGCTTAGCACTTTCTCCTCGTTCTGGC
TTATCTTCGTCCTCAGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MRTLLASPRGALVKDDRLLPFLLRGKTLVTVGDVTTKRCLELGLVPRTAIFDGKTRRSQWVELRAPNGVLKAFNPPGQIC
LDAAKVVKKAILTSTWVKVEGEEDLLAIPALLSSENGWALLYGQPKAGVVLVEINKYTKLHFLEIIKMFDGDVEEFLREF
DYDPNQPLLGELDERLYDLLFPEL

Sequences:

>Translated_184_residues
MRTLLASPRGALVKDDRLLPFLLRGKTLVTVGDVTTKRCLELGLVPRTAIFDGKTRRSQWVELRAPNGVLKAFNPPGQIC
LDAAKVVKKAILTSTWVKVEGEEDLLAIPALLSSENGWALLYGQPKAGVVLVEINKYTKLHFLEIIKMFDGDVEEFLREF
DYDPNQPLLGELDERLYDLLFPEL
>Mature_184_residues
MRTLLASPRGALVKDDRLLPFLLRGKTLVTVGDVTTKRCLELGLVPRTAIFDGKTRRSQWVELRAPNGVLKAFNPPGQIC
LDAAKVVKKAILTSTWVKVEGEEDLLAIPALLSSENGWALLYGQPKAGVVLVEINKYTKLHFLEIIKMFDGDVEEFLREF
DYDPNQPLLGELDERLYDLLFPEL

Specific function: Unknown

COG id: COG1909

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0218 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y082_IGNH4 (A8A8L4)

Other databases:

- EMBL:   CP000816
- RefSeq:   YP_001434673.1
- STRING:   A8A8L4
- GeneID:   5562123
- GenomeReviews:   CP000816_GR
- KEGG:   iho:Igni_0082
- eggNOG:   arNOG08667
- HOGENOM:   HBG724144
- OMA:   IHAPENS
- BioCyc:   IHOS453591:IGNI_0082-MONOMER
- HAMAP:   MF_00590
- InterPro:   IPR007164

Pfam domain/function: PF04019 DUF359

EC number: NA

Molecular weight: Translated: 20678; Mature: 20678

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLLASPRGALVKDDRLLPFLLRGKTLVTVGDVTTKRCLELGLVPRTAIFDGKTRRSQW
CCCCCCCCCCCEEECCCCCCCEECCCEEEEECCHHHHHHHHHCCCCCCEEECCCCCCCCE
VELRAPNGVLKAFNPPGQICLDAAKVVKKAILTSTWVKVEGEEDLLAIPALLSSENGWAL
EEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEHHHHCCCCCEEE
LYGQPKAGVVLVEINKYTKLHFLEIIKMFDGDVEEFLREFDYDPNQPLLGELDERLYDLL
EEECCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHH
FPEL
CCCC
>Mature Secondary Structure
MRTLLASPRGALVKDDRLLPFLLRGKTLVTVGDVTTKRCLELGLVPRTAIFDGKTRRSQW
CCCCCCCCCCCEEECCCCCCCEECCCEEEEECCHHHHHHHHHCCCCCCEEECCCCCCCCE
VELRAPNGVLKAFNPPGQICLDAAKVVKKAILTSTWVKVEGEEDLLAIPALLSSENGWAL
EEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEHHHHCCCCCEEE
LYGQPKAGVVLVEINKYTKLHFLEIIKMFDGDVEEFLREFDYDPNQPLLGELDERLYDLL
EEECCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHH
FPEL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA