| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156936875
Identifier: 156936875
GI number: 156936875
Start: 76162
End: 76518
Strand: Reverse
Name: 156936875
Synonym: Igni_0080
Alternate gene names: NA
Gene position: 76518-76162 (Counterclockwise)
Preceding gene: 156936877
Following gene: 156936874
Centisome position: 5.9
GC content: 54.9
Gene sequence:
>357_bases GTGGTCTGTAAGCCGAAGGTGGTCAAGTGGGATGAGGTAGAAGCAAAGGAGGTCCCCCGTGAGGTCGCCACCAAGACCAC TATCCGCTGGGTCATAGGGCCCGGGGAGGCCCCTACGTTCTACTTGAGGGTCTTCGAGGTCGAGCCTGGAGGCGAAATAT TCGAACACTCCCACCCTTGGGAGCACGAGATATTCGTGCTTAACGGTAAAGGGATAGTAAGAATAAACGGGGAAGAGTAC GAAGTGGGGCCCGGGACCGTTCTGTACATACCTCCGTGCTCCAAGCACTACTACAAGAACACCGGAGACGAGGTCCTCCG CTTCATATGTATAATTCCAAAGGAAGGGGCCAAGTGA
Upstream 100 bases:
>100_bases CCCGCTTGGAGCGGGCGTCGAGGCCTCCCAGCCGTCGCCGGGAACGGCGGGGCCCAACTCCAGCTTTAACCCAAAGCTCG TAAAAGCGTAAGGGGAAGCC
Downstream 100 bases:
>100_bases GCCCCCTATACATTACCTTTTCAGAAAGTTTAGGTAACGAGTGAGCCCGATGATATACATAGAAGGAGTCGAGGTCTCGT GGCTGGGCCACGACGGCTTC
Product: cupin 2 domain-containing protein
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin Region; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Domain Protein; Cupin Superfamily Protein; Cupin Superfamily; Cupin Domain Family Protein; Cupin Domain-Containing Protein
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MVCKPKVVKWDEVEAKEVPREVATKTTIRWVIGPGEAPTFYLRVFEVEPGGEIFEHSHPWEHEIFVLNGKGIVRINGEEY EVGPGTVLYIPPCSKHYYKNTGDEVLRFICIIPKEGAK
Sequences:
>Translated_118_residues MVCKPKVVKWDEVEAKEVPREVATKTTIRWVIGPGEAPTFYLRVFEVEPGGEIFEHSHPWEHEIFVLNGKGIVRINGEEY EVGPGTVLYIPPCSKHYYKNTGDEVLRFICIIPKEGAK >Mature_118_residues MVCKPKVVKWDEVEAKEVPREVATKTTIRWVIGPGEAPTFYLRVFEVEPGGEIFEHSHPWEHEIFVLNGKGIVRINGEEY EVGPGTVLYIPPCSKHYYKNTGDEVLRFICIIPKEGAK
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13455; Mature: 13455
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVCKPKVVKWDEVEAKEVPREVATKTTIRWVIGPGEAPTFYLRVFEVEPGGEIFEHSHPW CCCCCCCEECCCCCHHHCCHHHCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCC EHEIFVLNGKGIVRINGEEYEVGPGTVLYIPPCSKHYYKNTGDEVLRFICIIPKEGAK CEEEEEECCCEEEEECCCEEECCCCEEEEECCCCCCCCCCCHHHEEEEEEEECCCCCC >Mature Secondary Structure MVCKPKVVKWDEVEAKEVPREVATKTTIRWVIGPGEAPTFYLRVFEVEPGGEIFEHSHPW CCCCCCCEECCCCCHHHCCHHHCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCC EHEIFVLNGKGIVRINGEEYEVGPGTVLYIPPCSKHYYKNTGDEVLRFICIIPKEGAK CEEEEEECCCEEEEECCCEEECCCCEEEEECCCCCCCCCCCHHHEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA