| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is creN7
Identifier: 156936834
GI number: 156936834
Start: 37776
End: 37943
Strand: Direct
Name: creN7
Synonym: Igni_0039
Alternate gene names: 156936834
Gene position: 37776-37943 (Clockwise)
Preceding gene: 156936828
Following gene: 156936835
Centisome position: 2.91
GC content: 58.33
Gene sequence:
>168_bases ATGCCCAAGTGCCCTAAGTGCGGCGCGGAGGTTAAGGAGCCCATCAAGACTTGGGTGTTGGCTCCCAAGGGAAGGAAAGG AGTGATAATAGGCCTCTTCAGGTGCCCCAACGGGCACTACTTCAGGGCGAAGGTGGGCGAAGCTCCTCCGAAGAAGGAGG CAGCCTAA
Upstream 100 bases:
>100_bases AGGATTCATGTAATGCTAGTTTAAAGGTCTCAAGAAATAATTTATAAGCACGGTGAGCCAGAAGGAATAGTGGGAAAGAG AAGAGGGGAGGTGAGAGGAA
Downstream 100 bases:
>100_bases GGGATCGCCAACGATCCTCGCTCAACATAACCCTTTTTTCACCTTTAAACAAAACTTGGCCAGGGTTTCGGTATATGGGC TTCAAAGTCAAGGATATAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 54
Protein sequence:
>55_residues MPKCPKCGAEVKEPIKTWVLAPKGRKGVIIGLFRCPNGHYFRAKVGEAPPKKEAA
Sequences:
>Translated_55_residues MPKCPKCGAEVKEPIKTWVLAPKGRKGVIIGLFRCPNGHYFRAKVGEAPPKKEAA >Mature_54_residues PKCPKCGAEVKEPIKTWVLAPKGRKGVIIGLFRCPNGHYFRAKVGEAPPKKEAA
Specific function: A probable chromatin protein, binds double-strand DNA without sequence specificity. Constrains negative DNA supercoils
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Cren7 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CREN7_IGNH4 (A8A8H1)
Other databases:
- EMBL: CP000816 - RefSeq: YP_001434630.1 - ProteinModelPortal: A8A8H1 - SMR: A8A8H1 - STRING: A8A8H1 - GeneID: 5562962 - GenomeReviews: CP000816_GR - KEGG: iho:Igni_0039 - eggNOG: arNOG15044 - HOGENOM: HBG460549 - BioCyc: IHOS453591:IGNI_0039-MONOMER - GO: GO:0005737 - HAMAP: MF_01387 - InterPro: IPR020906
Pfam domain/function: PF11520 Cren7
EC number: NA
Molecular weight: Translated: 6004; Mature: 5873
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKCPKCGAEVKEPIKTWVLAPKGRKGVIIGLFRCPNGHYFRAKVGEAPPKKEAA CCCCCCCCCHHHHHHHHEEECCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCC >Mature Secondary Structure PKCPKCGAEVKEPIKTWVLAPKGRKGVIIGLFRCPNGHYFRAKVGEAPPKKEAA CCCCCCCCHHHHHHHHEEECCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA