| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156936828
Identifier: 156936828
GI number: 156936828
Start: 30684
End: 31172
Strand: Direct
Name: 156936828
Synonym: Igni_0033
Alternate gene names: NA
Gene position: 30684-31172 (Clockwise)
Preceding gene: 156936827
Following gene: 156936834
Centisome position: 2.36
GC content: 55.21
Gene sequence:
>489_bases GTGATAGAGCCTCTGGAGGACCCGGAGACCCCGGTGGTACTGCTATCAATAAAGCCTAGGTACGCCCAGAGGATCCTCAG CGGCATGAAGAAGTTCGAGCTGAGAACTTGGATAGGCTTGAACCTCTACAGCGGTATGTTAGTGGTGATGTACGCTTCGG GCAACGTGAAGGCGATAGTTGGTGAGTTCAGGGTAGGGAAGGTTTACAAGGGCAGGCCCGAGTTCGTCTGGGGGCGCTTG ATCGAAGAGGGGGGAGAGGAGAAGACCGGCGTAGGGGAAGAGGACTACCTTTACATAGCTAGGGCGAAGAAGGCCATGGC CCTAGAGGTGTTGGAGCCTAAGGTGTACAAGAGGCCGCCCAAATTGGAGGAGATAAGAATGATAATACCCGGCTGGCTCC CCCCTATGAGCCACACTTTGCTCGGCACCGGCGACCCCCTCTGGGAGATGGTAATTAAACCCGTCAGAGAGGTTTCCGAG ATACCTTAA
Upstream 100 bases:
>100_bases GGGCTGTAGGGAGGGCCGCGATGTTCGTTTCTAACGCGTTCCCCGCTTCGGACTTGTTTTATGAGTTGGGCAACTTTACG CTAACGGCGGTGGGGCTGAG
Downstream 100 bases:
>100_bases TCCTCAAACAACTCCTTACCTCCGATTTTCTTCTTAATTTCGTATAGTAACATTTTGTTCTTGGACTTTAAATAGTCTAT AAATTCGTTTCTCCTAGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MIEPLEDPETPVVLLSIKPRYAQRILSGMKKFELRTWIGLNLYSGMLVVMYASGNVKAIVGEFRVGKVYKGRPEFVWGRL IEEGGEEKTGVGEEDYLYIARAKKAMALEVLEPKVYKRPPKLEEIRMIIPGWLPPMSHTLLGTGDPLWEMVIKPVREVSE IP
Sequences:
>Translated_162_residues MIEPLEDPETPVVLLSIKPRYAQRILSGMKKFELRTWIGLNLYSGMLVVMYASGNVKAIVGEFRVGKVYKGRPEFVWGRL IEEGGEEKTGVGEEDYLYIARAKKAMALEVLEPKVYKRPPKLEEIRMIIPGWLPPMSHTLLGTGDPLWEMVIKPVREVSE IP >Mature_162_residues MIEPLEDPETPVVLLSIKPRYAQRILSGMKKFELRTWIGLNLYSGMLVVMYASGNVKAIVGEFRVGKVYKGRPEFVWGRL IEEGGEEKTGVGEEDYLYIARAKKAMALEVLEPKVYKRPPKLEEIRMIIPGWLPPMSHTLLGTGDPLWEMVIKPVREVSE IP
Specific function: Unknown
COG id: COG4933
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18426; Mature: 18426
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEPLEDPETPVVLLSIKPRYAQRILSGMKKFELRTWIGLNLYSGMLVVMYASGNVKAIV CCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEECCCCEEEEE GEFRVGKVYKGRPEFVWGRLIEEGGEEKTGVGEEDYLYIARAKKAMALEVLEPKVYKRPP ECEEECCEECCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCHHHCCCC KLEEIRMIIPGWLPPMSHTLLGTGDPLWEMVIKPVREVSEIP CHHHHEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIEPLEDPETPVVLLSIKPRYAQRILSGMKKFELRTWIGLNLYSGMLVVMYASGNVKAIV CCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEECCCCEEEEE GEFRVGKVYKGRPEFVWGRLIEEGGEEKTGVGEEDYLYIARAKKAMALEVLEPKVYKRPP ECEEECCEECCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCHHHCCCC KLEEIRMIIPGWLPPMSHTLLGTGDPLWEMVIKPVREVSEIP CHHHHEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA