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The map label for this gene is yjjK [C]

Identifier: 156936833

GI number: 156936833

Start: 35720

End: 37534

Strand: Reverse

Name: yjjK [C]

Synonym: Igni_0038

Alternate gene names: 156936833

Gene position: 37534-35720 (Counterclockwise)

Preceding gene: 156936837

Following gene: 156936832

Centisome position: 2.89

GC content: 52.4

Gene sequence:

>1815_bases
TTGGAGAGGACAGTGCCTAGGGTAGCAGTAATAGACAAGGAGTTGTGCAAGCCGGACAAGTGCAATTACGAGTGCATAAG
ATTCTGTCCAATAAATAAAACCGGGAGGAACAAAGCGATCGAGCTCGGAGAGGACGGGAAGCCGATAATACACGAACTAG
TGTGTACTGGGTGCGGGATTTGCATCAAGAAGTGTCCGTTCCAAGCGATTCACATAGAGAACTTGCCAGAAGAGGTGGAA
GAGAAGCTGGTCCACAGATACGGCAAGAACGGTTTCGCGCTCTACGGCTTACCGGTCCCCAAGAGGGGACAAGTCACGGG
CATCATAGGGAGAAACGGCGCCGGCAAGTCCACTTCGCTGAAGATCTTGAGCGGTCTCTTGAAACCCAACCTAGGCAAGG
AAGAGGCCTCTTGGGACGAGGTCCTAAAGAGATTCAGGGGGACCGAATTATTCAACTATTTGAAAGATTTGGCTAACGGG
AAGATAAGGGTTGCGTACAAGTTACAGTACGTAGCGGAGGCCGCTAAGCTGCTGAAGGGGACGGTAGGCCAACTGCTCGC
GCGGGTGGACGAGAGGGGGATCGCGAGGGAAGTAGCGCAAGCGCTAAACATAGCCCACCTATGGGAGAGGGACGTAAGGA
AGCTCTCGGGCGGCGAGCTCCAGAGGTTCCTAATAGCAGCGGTCCTAAGTAAGGACGCTGACCTTTATGCGTTCGACGAA
CCCGCGGCTTACCTCGACGTAAAGGAGAGGATAAATATGGCCAGAGCGATTAAGAAGTTCGTCCCACCCAACCGATACGT
GCTGATAATAGAACACGACTTGGCAATCCTAGATTACTTGTCCGACTTGGTTCACATCGTATACGGCGTGCCGGGGGTTT
ATGGAATAGTATCACAGCCCTATAGCACGAGGGTGGGGATAAACCATTACATAAGGGGGTTCTTGCCCAGCGAAAACATG
AGGATAAGGGACAAGCCTATAACGTTTGTTAACCCAGAGCTCAGGGAGAAGGTAGTCTCAACTGAAGTATACTTGGAGTG
GCCGTTCATGACAAAGAAGTTAGGCGACTTCGTCCTAGAGGTAAACCCTGGCGAGATTCATCGAGGGGAAATAATAGGTA
TATTGGGACCTAACGGAATAGGTAAATCTACCTTTATCAAACTAATAGCTGGCATCCTCAAGCCGGACAATGCCGACTTC
GTGCTCCCGCAGTTGAGGCTCGCGTATAAGCCCCAGTACGTTACACACGAAATGTTCGGAAAAAACGAGACCGTTAAGGA
CGTCCTCAGAAAGGTTAGAAGCGACTTCTTGGACACCTCCAGTTGGTACTACGTCGAAGTGGTGAAGAGGCTCGGGTTGA
ATAGATTGTTGGAAAAGGAGGTTAAGCACTTGTCGGGCGGAGAGCTCCAGAAGCTCGCCGTGGCCGTTACTCTAGGAAAA
GAGGCCGACCTATACTTGCTGGACGAGCCCTCCGCGTTCTTGGACGTCGAGGAGAGGCTCGCGGTGGGCGACGCAATAAG
ACACATCGTAGAGGGTTCCGGGGCGGCGGCCTTCGTCGTAGACCACGACTTGGTGATGATAGACCTAATAACGGATAGGG
TAATGGTGTTCAAGGGCGAGCCCGGTAAGCACGGCGTCGCAGAGCCCCCAACCAGCTTGAGGAGGGGTATGAACGAGTTC
CTAAAGGAGCTCGGAATAACCTTTAGGAGGGACCCGGAGACGGGGAGGCCTAGAGTAAACAAAGAAGGGAGTCGCTTGGA
CAGGATGCAGAAATCCATAGGCGAGTATTATTACACTCTGCCGGCGAGGGAGTAG

Upstream 100 bases:

>100_bases
AAATATTAGGCGATGTGAGTATTTTCCGTGACTTACGTGAGGTTAGAGCCCGCGCCCTCCATCGCCCAATTTTAAAAATG
CTCCTTCGTGGGGCTCGAGT

Downstream 100 bases:

>100_bases
CGGCCATGGGTGTAGATGAATACGTAGAAGCGTCCGAGAGACAAAGCGAACTGTTGGAAGAACTCAAGAAGATAATTAAG
AGTCTAGAAGAAGCTCCAGC

Product: ATPase RIL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 604; Mature: 604

Protein sequence:

>604_residues
MERTVPRVAVIDKELCKPDKCNYECIRFCPINKTGRNKAIELGEDGKPIIHELVCTGCGICIKKCPFQAIHIENLPEEVE
EKLVHRYGKNGFALYGLPVPKRGQVTGIIGRNGAGKSTSLKILSGLLKPNLGKEEASWDEVLKRFRGTELFNYLKDLANG
KIRVAYKLQYVAEAAKLLKGTVGQLLARVDERGIAREVAQALNIAHLWERDVRKLSGGELQRFLIAAVLSKDADLYAFDE
PAAYLDVKERINMARAIKKFVPPNRYVLIIEHDLAILDYLSDLVHIVYGVPGVYGIVSQPYSTRVGINHYIRGFLPSENM
RIRDKPITFVNPELREKVVSTEVYLEWPFMTKKLGDFVLEVNPGEIHRGEIIGILGPNGIGKSTFIKLIAGILKPDNADF
VLPQLRLAYKPQYVTHEMFGKNETVKDVLRKVRSDFLDTSSWYYVEVVKRLGLNRLLEKEVKHLSGGELQKLAVAVTLGK
EADLYLLDEPSAFLDVEERLAVGDAIRHIVEGSGAAAFVVDHDLVMIDLITDRVMVFKGEPGKHGVAEPPTSLRRGMNEF
LKELGITFRRDPETGRPRVNKEGSRLDRMQKSIGEYYYTLPARE

Sequences:

>Translated_604_residues
MERTVPRVAVIDKELCKPDKCNYECIRFCPINKTGRNKAIELGEDGKPIIHELVCTGCGICIKKCPFQAIHIENLPEEVE
EKLVHRYGKNGFALYGLPVPKRGQVTGIIGRNGAGKSTSLKILSGLLKPNLGKEEASWDEVLKRFRGTELFNYLKDLANG
KIRVAYKLQYVAEAAKLLKGTVGQLLARVDERGIAREVAQALNIAHLWERDVRKLSGGELQRFLIAAVLSKDADLYAFDE
PAAYLDVKERINMARAIKKFVPPNRYVLIIEHDLAILDYLSDLVHIVYGVPGVYGIVSQPYSTRVGINHYIRGFLPSENM
RIRDKPITFVNPELREKVVSTEVYLEWPFMTKKLGDFVLEVNPGEIHRGEIIGILGPNGIGKSTFIKLIAGILKPDNADF
VLPQLRLAYKPQYVTHEMFGKNETVKDVLRKVRSDFLDTSSWYYVEVVKRLGLNRLLEKEVKHLSGGELQKLAVAVTLGK
EADLYLLDEPSAFLDVEERLAVGDAIRHIVEGSGAAAFVVDHDLVMIDLITDRVMVFKGEPGKHGVAEPPTSLRRGMNEF
LKELGITFRRDPETGRPRVNKEGSRLDRMQKSIGEYYYTLPARE
>Mature_604_residues
MERTVPRVAVIDKELCKPDKCNYECIRFCPINKTGRNKAIELGEDGKPIIHELVCTGCGICIKKCPFQAIHIENLPEEVE
EKLVHRYGKNGFALYGLPVPKRGQVTGIIGRNGAGKSTSLKILSGLLKPNLGKEEASWDEVLKRFRGTELFNYLKDLANG
KIRVAYKLQYVAEAAKLLKGTVGQLLARVDERGIAREVAQALNIAHLWERDVRKLSGGELQRFLIAAVLSKDADLYAFDE
PAAYLDVKERINMARAIKKFVPPNRYVLIIEHDLAILDYLSDLVHIVYGVPGVYGIVSQPYSTRVGINHYIRGFLPSENM
RIRDKPITFVNPELREKVVSTEVYLEWPFMTKKLGDFVLEVNPGEIHRGEIIGILGPNGIGKSTFIKLIAGILKPDNADF
VLPQLRLAYKPQYVTHEMFGKNETVKDVLRKVRSDFLDTSSWYYVEVVKRLGLNRLLEKEVKHLSGGELQKLAVAVTLGK
EADLYLLDEPSAFLDVEERLAVGDAIRHIVEGSGAAAFVVDHDLVMIDLITDRVMVFKGEPGKHGVAEPPTSLRRGMNEF
LKELGITFRRDPETGRPRVNKEGSRLDRMQKSIGEYYYTLPARE

Specific function: Unknown

COG id: COG1245

COG function: function code R; Predicted ATPase, RNase L inhibitor (RLI) homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI108773784, Length=603, Percent_Identity=45.273631840796, Blast_Score=542, Evalue=1e-154,
Organism=Homo sapiens, GI108773782, Length=603, Percent_Identity=45.273631840796, Blast_Score=542, Evalue=1e-154,
Organism=Homo sapiens, GI27436953, Length=177, Percent_Identity=29.3785310734463, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI2367384, Length=506, Percent_Identity=25.4940711462451, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1788210, Length=482, Percent_Identity=23.8589211618257, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI1788165, Length=186, Percent_Identity=29.0322580645161, Blast_Score=76, Evalue=7e-15,
Organism=Escherichia coli, GI1790467, Length=202, Percent_Identity=27.7227722772277, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1786803, Length=199, Percent_Identity=30.1507537688442, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI87081791, Length=219, Percent_Identity=27.3972602739726, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI87081782, Length=198, Percent_Identity=31.8181818181818, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1789891, Length=188, Percent_Identity=27.6595744680851, Blast_Score=66, Evalue=8e-12,
Organism=Escherichia coli, GI1787758, Length=207, Percent_Identity=27.0531400966184, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1790739, Length=232, Percent_Identity=25.8620689655172, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1787500, Length=195, Percent_Identity=25.6410256410256, Blast_Score=63, Evalue=5e-11,
Organism=Escherichia coli, GI1787759, Length=208, Percent_Identity=26.9230769230769, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17555800, Length=600, Percent_Identity=43.5, Blast_Score=523, Evalue=1e-148,
Organism=Caenorhabditis elegans, GI17559834, Length=498, Percent_Identity=23.4939759036145, Blast_Score=77, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6320296, Length=603, Percent_Identity=44.7761194029851, Blast_Score=531, Evalue=1e-151,
Organism=Drosophila melanogaster, GI24661270, Length=596, Percent_Identity=43.4563758389262, Blast_Score=535, Evalue=1e-152,
Organism=Drosophila melanogaster, GI21355589, Length=596, Percent_Identity=43.4563758389262, Blast_Score=535, Evalue=1e-152,
Organism=Drosophila melanogaster, GI116007184, Length=200, Percent_Identity=29.5, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI221500365, Length=200, Percent_Identity=29.5, Blast_Score=72, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR013283
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR007209 [H]

Pfam domain/function: PF00005 ABC_tran; PF04068 RLI [H]

EC number: NA

Molecular weight: Translated: 67960; Mature: 67960

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS00198 4FE4S_FERREDOXIN ; PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERTVPRVAVIDKELCKPDKCNYECIRFCPINKTGRNKAIELGEDGKPIIHELVCTGCGI
CCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHCCCH
CIKKCPFQAIHIENLPEEVEEKLVHRYGKNGFALYGLPVPKRGQVTGIIGRNGAGKSTSL
HHHHCCCCEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCCHHH
KILSGLLKPNLGKEEASWDEVLKRFRGTELFNYLKDLANGKIRVAYKLQYVAEAAKLLKG
HHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHH
TVGQLLARVDERGIAREVAQALNIAHLWERDVRKLSGGELQRFLIAAVLSKDADLYAFDE
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECC
PAAYLDVKERINMARAIKKFVPPNRYVLIIEHDLAILDYLSDLVHIVYGVPGVYGIVSQP
CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHCCC
YSTRVGINHYIRGFLPSENMRIRDKPITFVNPELREKVVSTEVYLEWPFMTKKLGDFVLE
CCCCCCHHHHHHCCCCCCCCEEECCCCEEECHHHHHHHHCCEEEEECCHHHHHHCCEEEE
VNPGEIHRGEIIGILGPNGIGKSTFIKLIAGILKPDNADFVLPQLRLAYKPQYVTHEMFG
ECCCCEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEECHHHHHHCCCCHHHHHHHC
KNETVKDVLRKVRSDFLDTSSWYYVEVVKRLGLNRLLEKEVKHLSGGELQKLAVAVTLGK
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEEEEEEEECC
EADLYLLDEPSAFLDVEERLAVGDAIRHIVEGSGAAAFVVDHDLVMIDLITDRVMVFKGE
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCEEEEEECC
PGKHGVAEPPTSLRRGMNEFLKELGITFRRDPETGRPRVNKEGSRLDRMQKSIGEYYYTL
CCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCEEEEC
PARE
CCCC
>Mature Secondary Structure
MERTVPRVAVIDKELCKPDKCNYECIRFCPINKTGRNKAIELGEDGKPIIHELVCTGCGI
CCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHCCCH
CIKKCPFQAIHIENLPEEVEEKLVHRYGKNGFALYGLPVPKRGQVTGIIGRNGAGKSTSL
HHHHCCCCEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCCHHH
KILSGLLKPNLGKEEASWDEVLKRFRGTELFNYLKDLANGKIRVAYKLQYVAEAAKLLKG
HHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHH
TVGQLLARVDERGIAREVAQALNIAHLWERDVRKLSGGELQRFLIAAVLSKDADLYAFDE
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECC
PAAYLDVKERINMARAIKKFVPPNRYVLIIEHDLAILDYLSDLVHIVYGVPGVYGIVSQP
CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHCCC
YSTRVGINHYIRGFLPSENMRIRDKPITFVNPELREKVVSTEVYLEWPFMTKKLGDFVLE
CCCCCCHHHHHHCCCCCCCCEEECCCCEEECHHHHHHHHCCEEEEECCHHHHHHCCEEEE
VNPGEIHRGEIIGILGPNGIGKSTFIKLIAGILKPDNADFVLPQLRLAYKPQYVTHEMFG
ECCCCEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEECHHHHHHCCCCHHHHHHHC
KNETVKDVLRKVRSDFLDTSSWYYVEVVKRLGLNRLLEKEVKHLSGGELQKLAVAVTLGK
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEEEEEEEECC
EADLYLLDEPSAFLDVEERLAVGDAIRHIVEGSGAAAFVVDHDLVMIDLITDRVMVFKGE
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCEEEEEECC
PGKHGVAEPPTSLRRGMNEFLKELGITFRRDPETGRPRVNKEGSRLDRMQKSIGEYYYTL
CCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCEEEEC
PARE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]