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The map label for this gene is xerC [H]

Identifier: 156936639

GI number: 156936639

Start: 80515

End: 81492

Strand: Direct

Name: xerC [H]

Synonym: ESA_pESA3p05520

Alternate gene names: 156936639

Gene position: 80515-81492 (Clockwise)

Preceding gene: 156936638

Following gene: 156936640

Centisome position: 61.37

GC content: 61.66

Gene sequence:

>978_bases
ATGATGACGGAACTGCCTGACGACAATCTGCTGCCTGGCGCTTTTTCAGGTCTCGATCCCCATGCGCTGTCAGTGGGTGA
CGAGGCGCTGCCCCTCAACCCGGCGATGGCATATCTTTTAAGCCTGCCTTCCGCCGCGAGCCGCCAGACCATGCGATCCT
TCCTGCATATCGTCGCAGGCATGCTCGGTGCTCGCGCGTTGCAGCACTGCCCCTGGGGCAGCCTGCGCCGCCATCATGTG
CAAGGACTGCTGGAGATGCTTTCGGCTTCCGGGCGCGCACCTGCCACCATCAATACCTATCTGTCTGCCCTGAAAGGCAC
CGCCCGCGAGGCGTGGATGATGAAGCTGATGGACACCGACAGCTATCAGCAAATCCTTGCCGTGCGGGCGGTACGCGGCA
GTCGTCTCACCCGCGGGCGTGCATTAACTCCGGAAGAAGTGCGCGCGCTGTTTTCGCTCTGCGAGCAGGACAAAAGCTGT
AAAGGCCCGCGCGACGCGGCGATGCTGGCGGTAATGCTGGGCTGCGGACTGCGCCGTTCGGAAGTGGTCGGGCTGGATTA
TGCGAGCATTCTTGAGCAGGACCAGGCGCTGCGCGTGCTCGGCAAAGGAAACAAAGAGCGGCTGGCATTTATGCCGGACA
CCGTCTGGCAGCGGCTCCGGCACTGGACTGACAGCGTACGCGGCGAATACCCCGGCCCGCTCTTCACCCGCATCCGCGCG
GGTGACGATGTCACGTCTGAGCGCCTGACCCCACAGGCGGTGTATCATATTCTGAACGAACGCCGTATGCAGTGCGGCAT
TGATAACTGCGCACCGCACGATCTTCGCCGCACGTTCGCTTCCATGATGCTCGATAACGGCGAAGATCTGATAACGGTAC
GCGACGCAATGGGCCATGCCAGCGTCACGACAACACAAAAATATGACCGCCGTGGCGATGCCCGCCTGCGCCGCGCGGCA
GGCAAAATTAAGCTTTAA

Upstream 100 bases:

>100_bases
TACCTTTGAAAAAGTAGCTTTACCGAAAAGCACGCTTAAGGGGATAATCCTGCTACTTTTTACGAGGCGCAACATCGCGG
CTGCGTGCGTTTACGAGGGG

Downstream 100 bases:

>100_bases
AAAAGCGGTTAACGGCCCATTGCGTGGCCCGGCAAAATGTTACGCTCACCATCATCGTTCAACACTTTCTCAACTTCCAA
AACCAGGGACAGGTATGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MMTELPDDNLLPGAFSGLDPHALSVGDEALPLNPAMAYLLSLPSAASRQTMRSFLHIVAGMLGARALQHCPWGSLRRHHV
QGLLEMLSASGRAPATINTYLSALKGTAREAWMMKLMDTDSYQQILAVRAVRGSRLTRGRALTPEEVRALFSLCEQDKSC
KGPRDAAMLAVMLGCGLRRSEVVGLDYASILEQDQALRVLGKGNKERLAFMPDTVWQRLRHWTDSVRGEYPGPLFTRIRA
GDDVTSERLTPQAVYHILNERRMQCGIDNCAPHDLRRTFASMMLDNGEDLITVRDAMGHASVTTTQKYDRRGDARLRRAA
GKIKL

Sequences:

>Translated_325_residues
MMTELPDDNLLPGAFSGLDPHALSVGDEALPLNPAMAYLLSLPSAASRQTMRSFLHIVAGMLGARALQHCPWGSLRRHHV
QGLLEMLSASGRAPATINTYLSALKGTAREAWMMKLMDTDSYQQILAVRAVRGSRLTRGRALTPEEVRALFSLCEQDKSC
KGPRDAAMLAVMLGCGLRRSEVVGLDYASILEQDQALRVLGKGNKERLAFMPDTVWQRLRHWTDSVRGEYPGPLFTRIRA
GDDVTSERLTPQAVYHILNERRMQCGIDNCAPHDLRRTFASMMLDNGEDLITVRDAMGHASVTTTQKYDRRGDARLRRAA
GKIKL
>Mature_325_residues
MMTELPDDNLLPGAFSGLDPHALSVGDEALPLNPAMAYLLSLPSAASRQTMRSFLHIVAGMLGARALQHCPWGSLRRHHV
QGLLEMLSASGRAPATINTYLSALKGTAREAWMMKLMDTDSYQQILAVRAVRGSRLTRGRALTPEEVRALFSLCEQDKSC
KGPRDAAMLAVMLGCGLRRSEVVGLDYASILEQDQALRVLGKGNKERLAFMPDTVWQRLRHWTDSVRGEYPGPLFTRIRA
GDDVTSERLTPQAVYHILNERRMQCGIDNCAPHDLRRTFASMMLDNGEDLITVRDAMGHASVTTTQKYDRRGDARLRRAA
GKIKL

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789261, Length=164, Percent_Identity=35.9756097560976, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1790244, Length=148, Percent_Identity=35.8108108108108, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 36055; Mature: 36055

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTELPDDNLLPGAFSGLDPHALSVGDEALPLNPAMAYLLSLPSAASRQTMRSFLHIVAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
MLGARALQHCPWGSLRRHHVQGLLEMLSASGRAPATINTYLSALKGTAREAWMMKLMDTD
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
SYQQILAVRAVRGSRLTRGRALTPEEVRALFSLCEQDKSCKGPRDAAMLAVMLGCGLRRS
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCH
EVVGLDYASILEQDQALRVLGKGNKERLAFMPDTVWQRLRHWTDSVRGEYPGPLFTRIRA
HEECCCHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCHHHHHCCC
GDDVTSERLTPQAVYHILNERRMQCGIDNCAPHDLRRTFASMMLDNGEDLITVRDAMGHA
CCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHCCCC
SVTTTQKYDRRGDARLRRAAGKIKL
CCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMTELPDDNLLPGAFSGLDPHALSVGDEALPLNPAMAYLLSLPSAASRQTMRSFLHIVAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
MLGARALQHCPWGSLRRHHVQGLLEMLSASGRAPATINTYLSALKGTAREAWMMKLMDTD
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
SYQQILAVRAVRGSRLTRGRALTPEEVRALFSLCEQDKSCKGPRDAAMLAVMLGCGLRRS
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCH
EVVGLDYASILEQDQALRVLGKGNKERLAFMPDTVWQRLRHWTDSVRGEYPGPLFTRIRA
HEECCCHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCHHHHHCCC
GDDVTSERLTPQAVYHILNERRMQCGIDNCAPHDLRRTFASMMLDNGEDLITVRDAMGHA
CCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHCCCC
SVTTTQKYDRRGDARLRRAAGKIKL
CCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]