| Definition | Cronobacter sakazakii ATCC BAA-894 plasmid pESA3, complete sequence. |
|---|---|
| Accession | NC_009780 |
| Length | 131,196 |
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The map label for this gene is yceL [C]
Identifier: 156936638
GI number: 156936638
Start: 77985
End: 79220
Strand: Direct
Name: yceL [C]
Synonym: ESA_pESA3p05519
Alternate gene names: 156936638
Gene position: 77985-79220 (Clockwise)
Preceding gene: 156936633
Following gene: 156936639
Centisome position: 59.44
GC content: 64.56
Gene sequence:
>1236_bases ATGTCCACTCATGCACCCCATGCCGCAAGGCATACTTCTCCTTATCTGCTCTCCGCCAGCCAGCTGGTATTTAACATCGG TTTTTACGCGGTGGTGCCGTTCCTGGCGATTTATCTGCGCGATGACATGCTGCTCTCCGGTGGGCTTATCGGCACTATCA TCGGGCTGCGCACGTTTTCACAACAGGGCATGTTTCTGCTGGGCGGCGCGCTTTCCGACCGCTACGGCGCGCGCGCCATT ATCCTGTGCGGCTGTGTGGTGCGAATTACGGGCTATCTGCTGCTGGCGCTGGGCGGCTCGCTGTGGGCGGTGGTACTCGG CGCGTGTCTGACGGGCGTTGGCGGCGCGCTGTTTTCGCCGTCGATTGAATCGCTGCTGGCGCAGGCCGGCACGCGCAGCG AAGCGGAAGGCAAGCGCAGCCGCGCCGAGTGGTTCGCGCTCTTTGCCGTCTGTGGCGAACTGGGCGCGGTGCTCGGCCCG GTCCTTGGCTCGCTGATGGCCGGGTTTGGTTTTAAAACGATGGCGCTCGCGGGTGCGGGCGTATTTATTGTCGCGCTGGT GGCGCTGTTTATACTGCTGCCGCGCACGCCGCATCGCGACGGCCCGCTGCAGATTGTTCCCTGGTGGCAGACCTTTCATC AGCCGCGCTTTGTCGCGTTTATCCTCGCCTACAGCGCGTATCTTTACAGCTATAACCAGCTCTATCTGGCGCTGCCGGTG GAGCTGCGCCGCTCCGGCAGCAGCGATGCCGCGCTCGGGCCGCTCTTTATTCTCGCCTCGCTGTTGATTATCACGTTGCA ACTGCCGCTCGCGCGGATCTCGCGCCGTTTCGGGGCGGCGCGTATGTTACCGCTCGGTTTCGGGCTGCTGGCGGCCTCGT TTGTCAGCGTGGCGCTGTTTGCCCCGCTCCCGCCTTTCGCGGGCTGGCTGCGGCTGTTGCCTGCAGCATGTATGGTGACG CTCCTGACGCTGGGTCAGATGATTATCGTTCCGGTGGGGATGGATCTGGTTCCGCGTTTCGCCGCGGGCCGTAATCTCGG CGCGCACTACGGCGCGCTGGCCTCGATGGGCGGCGTGGCGGTGCTGGCCGGTAATTTTCTGCTGGGCGACGCGCTGGATA ACGCGCTGACGCCCGGCCCGCAGGCGGCGGTGCCGTGGCTGCTGCTGGCGGTCTTTCCGTTGTGCAGCGCGCTGGCGATG GCCGTGCTGTGTCGCTTCTACGCACCGAAGGGCTAA
Upstream 100 bases:
>100_bases ATCGTCTCGTTGACGGTTTTCGGCAGGCGAAAGTTGCCAGAGACGGCGCAAATATGTTTTAAGAGAGCCCTCACTTTTTC TGAACAGTTATGCGGTTTTC
Downstream 100 bases:
>100_bases GGGGCAGTCGGGAGAAGGAATATTACCCGATGAGTGACATTGTCACGTTTTAAACGGTTCCGTGGGCTGTTCACCCGCTA TGGCGGCGGGGAAACCACAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MSTHAPHAARHTSPYLLSASQLVFNIGFYAVVPFLAIYLRDDMLLSGGLIGTIIGLRTFSQQGMFLLGGALSDRYGARAI ILCGCVVRITGYLLLALGGSLWAVVLGACLTGVGGALFSPSIESLLAQAGTRSEAEGKRSRAEWFALFAVCGELGAVLGP VLGSLMAGFGFKTMALAGAGVFIVALVALFILLPRTPHRDGPLQIVPWWQTFHQPRFVAFILAYSAYLYSYNQLYLALPV ELRRSGSSDAALGPLFILASLLIITLQLPLARISRRFGAARMLPLGFGLLAASFVSVALFAPLPPFAGWLRLLPAACMVT LLTLGQMIIVPVGMDLVPRFAAGRNLGAHYGALASMGGVAVLAGNFLLGDALDNALTPGPQAAVPWLLLAVFPLCSALAM AVLCRFYAPKG
Sequences:
>Translated_411_residues MSTHAPHAARHTSPYLLSASQLVFNIGFYAVVPFLAIYLRDDMLLSGGLIGTIIGLRTFSQQGMFLLGGALSDRYGARAI ILCGCVVRITGYLLLALGGSLWAVVLGACLTGVGGALFSPSIESLLAQAGTRSEAEGKRSRAEWFALFAVCGELGAVLGP VLGSLMAGFGFKTMALAGAGVFIVALVALFILLPRTPHRDGPLQIVPWWQTFHQPRFVAFILAYSAYLYSYNQLYLALPV ELRRSGSSDAALGPLFILASLLIITLQLPLARISRRFGAARMLPLGFGLLAASFVSVALFAPLPPFAGWLRLLPAACMVT LLTLGQMIIVPVGMDLVPRFAAGRNLGAHYGALASMGGVAVLAGNFLLGDALDNALTPGPQAAVPWLLLAVFPLCSALAM AVLCRFYAPKG >Mature_410_residues STHAPHAARHTSPYLLSASQLVFNIGFYAVVPFLAIYLRDDMLLSGGLIGTIIGLRTFSQQGMFLLGGALSDRYGARAII LCGCVVRITGYLLLALGGSLWAVVLGACLTGVGGALFSPSIESLLAQAGTRSEAEGKRSRAEWFALFAVCGELGAVLGPV LGSLMAGFGFKTMALAGAGVFIVALVALFILLPRTPHRDGPLQIVPWWQTFHQPRFVAFILAYSAYLYSYNQLYLALPVE LRRSGSSDAALGPLFILASLLIITLQLPLARISRRFGAARMLPLGFGLLAASFVSVALFAPLPPFAGWLRLLPAACMVTL LTLGQMIIVPVGMDLVPRFAAGRNLGAHYGALASMGGVAVLAGNFLLGDALDNALTPGPQAAVPWLLLAVFPLCSALAMA VLCRFYAPKG
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI87081828, Length=400, Percent_Identity=26, Blast_Score=127, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43338; Mature: 43207
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTHAPHAARHTSPYLLSASQLVFNIGFYAVVPFLAIYLRDDMLLSGGLIGTIIGLRTFS CCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC QQGMFLLGGALSDRYGARAIILCGCVVRITGYLLLALGGSLWAVVLGACLTGVGGALFSP CCCCEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCH SIESLLAQAGTRSEAEGKRSRAEWFALFAVCGELGAVLGPVLGSLMAGFGFKTMALAGAG HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCH VFIVALVALFILLPRTPHRDGPLQIVPWWQTFHQPRFVAFILAYSAYLYSYNQLYLALPV HHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHCCCHHHHHHHHHHHHHHHHCCEEEEECH ELRRSGSSDAALGPLFILASLLIITLQLPLARISRRFGAARMLPLGFGLLAASFVSVALF HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH APLPPFAGWLRLLPAACMVTLLTLGQMIIVPVGMDLVPRFAAGRNLGAHYGALASMGGVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHCCCHH VLAGNFLLGDALDNALTPGPQAAVPWLLLAVFPLCSALAMAVLCRFYAPKG HHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure STHAPHAARHTSPYLLSASQLVFNIGFYAVVPFLAIYLRDDMLLSGGLIGTIIGLRTFS CCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC QQGMFLLGGALSDRYGARAIILCGCVVRITGYLLLALGGSLWAVVLGACLTGVGGALFSP CCCCEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCH SIESLLAQAGTRSEAEGKRSRAEWFALFAVCGELGAVLGPVLGSLMAGFGFKTMALAGAG HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCH VFIVALVALFILLPRTPHRDGPLQIVPWWQTFHQPRFVAFILAYSAYLYSYNQLYLALPV HHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHCCCHHHHHHHHHHHHHHHHCCEEEEECH ELRRSGSSDAALGPLFILASLLIITLQLPLARISRRFGAARMLPLGFGLLAASFVSVALF HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH APLPPFAGWLRLLPAACMVTLLTLGQMIIVPVGMDLVPRFAAGRNLGAHYGALASMGGVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHCCCHH VLAGNFLLGDALDNALTPGPQAAVPWLLLAVFPLCSALAMAVLCRFYAPKG HHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]