Definition Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome.
Accession NC_000916
Length 1,751,377

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Identifier: 15679453

GI number: 15679453

Start: 1318137

End: 1318793

Strand: Direct

Name: Not Available

Synonym: MTH1456

Alternate gene names: 15679453

Gene position: 1318137-1318793 (Clockwise)

Preceding gene: 15679452

Following gene: 15679454

Centisome position: 75.26

GC content: 52.21

Gene sequence:

>657_bases
ATGGACCCCCAGGGCAATGCAACCACTGGGTTCGGGATAAACAAGTCAGAACTGGAGTCAACAATATACACGGTCCTGAG
CCGAAAGGCAGCACTGTCCTCTGTGATAATGCCTGCAGAGCTCCAGGACCTCTACATAGCACCCAGTAACATATCCCTCA
GCGGTGCCGAGATAGAGCTCAGCAGTGAGATAGGATACCATGCCATCCTCCAGGAGTCACTGGGGGATGTGAGGAATGAC
TTTGACTACATATTCATAGACGCCCCACCATCCCTGGGCATACTCACACTCAACGCCCTCGTGGCCTCTGACAGTGTCAT
AATACCCATACAGGCAGAGTACTATGCCCTTGAGGGCATGGCAGACCTCCTGAAGACAATGAACCTGGTGGAAGAACGAC
TCCAGAGTCCCTGTCCGATAAAGGGGATACTGCTGACCCTCTACGATTCAAGGACACGACTTGCAAGGGACGTACAGAGG
GAGGTTGAGAAGTTTTTCGGTGAAAGGGAGAACATCTTCAGGACAAGGATACCCAGGAACGTTCGCCTTGCAGAGGCCCC
CAGCCACGGTAAGCCCTGCATAACCTATGACCCCGAAAGTACAGGTACAGAGGCCTACATGAAACTTGCAGCTGAAATAC
TTGAAATGGAGGGATAG

Upstream 100 bases:

>100_bases
TTTCAATCATAAACCAGAAGGGTGGCTGTGGAAAGACAACAACAGCCGTTAATCTATCAGCAGCACTTTCCTCCTTGACA
GGAGGGTTCTTGTAATCGAC

Downstream 100 bases:

>100_bases
GATGACACAGAAGAAGGGCCTTGGAATGGGACTGGATGCACTGATCCAGTCAAGGACAAGGAAGGAACCTGAAAAAGATA
CCGGAAAGGATGATGATGCA

Product: chromosome partitioning protein Soj

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MDPQGNATTGFGINKSELESTIYTVLSRKAALSSVIMPAELQDLYIAPSNISLSGAEIELSSEIGYHAILQESLGDVRND
FDYIFIDAPPSLGILTLNALVASDSVIIPIQAEYYALEGMADLLKTMNLVEERLQSPCPIKGILLTLYDSRTRLARDVQR
EVEKFFGERENIFRTRIPRNVRLAEAPSHGKPCITYDPESTGTEAYMKLAAEILEMEG

Sequences:

>Translated_218_residues
MDPQGNATTGFGINKSELESTIYTVLSRKAALSSVIMPAELQDLYIAPSNISLSGAEIELSSEIGYHAILQESLGDVRND
FDYIFIDAPPSLGILTLNALVASDSVIIPIQAEYYALEGMADLLKTMNLVEERLQSPCPIKGILLTLYDSRTRLARDVQR
EVEKFFGERENIFRTRIPRNVRLAEAPSHGKPCITYDPESTGTEAYMKLAAEILEMEG
>Mature_218_residues
MDPQGNATTGFGINKSELESTIYTVLSRKAALSSVIMPAELQDLYIAPSNISLSGAEIELSSEIGYHAILQESLGDVRND
FDYIFIDAPPSLGILTLNALVASDSVIIPIQAEYYALEGMADLLKTMNLVEERLQSPCPIKGILLTLYDSRTRLARDVQR
EVEKFFGERENIFRTRIPRNVRLAEAPSHGKPCITYDPESTGTEAYMKLAAEILEMEG

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR000392 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 24091; Mature: 24091

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPQGNATTGFGINKSELESTIYTVLSRKAALSSVIMPAELQDLYIAPSNISLSGAEIEL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEECCCEEEE
SSEIGYHAILQESLGDVRNDFDYIFIDAPPSLGILTLNALVASDSVIIPIQAEYYALEGM
CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEHHHHHCCCCEEEEECHHHHHHHHH
ADLLKTMNLVEERLQSPCPIKGILLTLYDSRTRLARDVQREVEKFFGERENIFRTRIPRN
HHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
VRLAEAPSHGKPCITYDPESTGTEAYMKLAAEILEMEG
CEEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDPQGNATTGFGINKSELESTIYTVLSRKAALSSVIMPAELQDLYIAPSNISLSGAEIEL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEECCCEEEE
SSEIGYHAILQESLGDVRNDFDYIFIDAPPSLGILTLNALVASDSVIIPIQAEYYALEGM
CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEHHHHHCCCCEEEEECHHHHHHHHH
ADLLKTMNLVEERLQSPCPIKGILLTLYDSRTRLARDVQREVEKFFGERENIFRTRIPRN
HHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
VRLAEAPSHGKPCITYDPESTGTEAYMKLAAEILEMEG
CEEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1552862; 7584024; 9384377; 8071208 [H]