| Definition | Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome. |
|---|---|
| Accession | NC_000916 |
| Length | 1,751,377 |
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Identifier: 15679453
GI number: 15679453
Start: 1318137
End: 1318793
Strand: Direct
Name: Not Available
Synonym: MTH1456
Alternate gene names: 15679453
Gene position: 1318137-1318793 (Clockwise)
Preceding gene: 15679452
Following gene: 15679454
Centisome position: 75.26
GC content: 52.21
Gene sequence:
>657_bases ATGGACCCCCAGGGCAATGCAACCACTGGGTTCGGGATAAACAAGTCAGAACTGGAGTCAACAATATACACGGTCCTGAG CCGAAAGGCAGCACTGTCCTCTGTGATAATGCCTGCAGAGCTCCAGGACCTCTACATAGCACCCAGTAACATATCCCTCA GCGGTGCCGAGATAGAGCTCAGCAGTGAGATAGGATACCATGCCATCCTCCAGGAGTCACTGGGGGATGTGAGGAATGAC TTTGACTACATATTCATAGACGCCCCACCATCCCTGGGCATACTCACACTCAACGCCCTCGTGGCCTCTGACAGTGTCAT AATACCCATACAGGCAGAGTACTATGCCCTTGAGGGCATGGCAGACCTCCTGAAGACAATGAACCTGGTGGAAGAACGAC TCCAGAGTCCCTGTCCGATAAAGGGGATACTGCTGACCCTCTACGATTCAAGGACACGACTTGCAAGGGACGTACAGAGG GAGGTTGAGAAGTTTTTCGGTGAAAGGGAGAACATCTTCAGGACAAGGATACCCAGGAACGTTCGCCTTGCAGAGGCCCC CAGCCACGGTAAGCCCTGCATAACCTATGACCCCGAAAGTACAGGTACAGAGGCCTACATGAAACTTGCAGCTGAAATAC TTGAAATGGAGGGATAG
Upstream 100 bases:
>100_bases TTTCAATCATAAACCAGAAGGGTGGCTGTGGAAAGACAACAACAGCCGTTAATCTATCAGCAGCACTTTCCTCCTTGACA GGAGGGTTCTTGTAATCGAC
Downstream 100 bases:
>100_bases GATGACACAGAAGAAGGGCCTTGGAATGGGACTGGATGCACTGATCCAGTCAAGGACAAGGAAGGAACCTGAAAAAGATA CCGGAAAGGATGATGATGCA
Product: chromosome partitioning protein Soj
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MDPQGNATTGFGINKSELESTIYTVLSRKAALSSVIMPAELQDLYIAPSNISLSGAEIELSSEIGYHAILQESLGDVRND FDYIFIDAPPSLGILTLNALVASDSVIIPIQAEYYALEGMADLLKTMNLVEERLQSPCPIKGILLTLYDSRTRLARDVQR EVEKFFGERENIFRTRIPRNVRLAEAPSHGKPCITYDPESTGTEAYMKLAAEILEMEG
Sequences:
>Translated_218_residues MDPQGNATTGFGINKSELESTIYTVLSRKAALSSVIMPAELQDLYIAPSNISLSGAEIELSSEIGYHAILQESLGDVRND FDYIFIDAPPSLGILTLNALVASDSVIIPIQAEYYALEGMADLLKTMNLVEERLQSPCPIKGILLTLYDSRTRLARDVQR EVEKFFGERENIFRTRIPRNVRLAEAPSHGKPCITYDPESTGTEAYMKLAAEILEMEG >Mature_218_residues MDPQGNATTGFGINKSELESTIYTVLSRKAALSSVIMPAELQDLYIAPSNISLSGAEIELSSEIGYHAILQESLGDVRND FDYIFIDAPPSLGILTLNALVASDSVIIPIQAEYYALEGMADLLKTMNLVEERLQSPCPIKGILLTLYDSRTRLARDVQR EVEKFFGERENIFRTRIPRNVRLAEAPSHGKPCITYDPESTGTEAYMKLAAEILEMEG
Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR000392 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 24091; Mature: 24091
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPQGNATTGFGINKSELESTIYTVLSRKAALSSVIMPAELQDLYIAPSNISLSGAEIEL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEECCCEEEE SSEIGYHAILQESLGDVRNDFDYIFIDAPPSLGILTLNALVASDSVIIPIQAEYYALEGM CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEHHHHHCCCCEEEEECHHHHHHHHH ADLLKTMNLVEERLQSPCPIKGILLTLYDSRTRLARDVQREVEKFFGERENIFRTRIPRN HHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC VRLAEAPSHGKPCITYDPESTGTEAYMKLAAEILEMEG CEEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MDPQGNATTGFGINKSELESTIYTVLSRKAALSSVIMPAELQDLYIAPSNISLSGAEIEL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEECCCEEEE SSEIGYHAILQESLGDVRNDFDYIFIDAPPSLGILTLNALVASDSVIIPIQAEYYALEGM CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEHHHHHCCCCEEEEECHHHHHHHHH ADLLKTMNLVEERLQSPCPIKGILLTLYDSRTRLARDVQREVEKFFGERENIFRTRIPRN HHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC VRLAEAPSHGKPCITYDPESTGTEAYMKLAAEILEMEG CEEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1552862; 7584024; 9384377; 8071208 [H]